Ll_transcript_339318

• Id Trinity: TRINITY_DN48521_c4_g1_i4
• Name Transcript: Ll_transcript_339318
• Sequence: ATTTAATCCTTTTTTTTTTTTTTCTTCATTAAACTATTCATTGTTTAAATTTTTCTTTTCTCTATTTTGTTCATTATTATTATTATTATTAGCCGTGCGG GTAACCCTTAACTCCTTAAGTATATCCATCCCCCAACCAAGCACACAACAAGTAACAAAACCCAACCCCTCTCCCGCCATGAACACTCAAGTTATCCTCT CCCACACAGTCCCACCTCGTTTCCCATCTTCTTTCTCACTTTTCCCTTCCACTAAAACAAAACCCACCTCTCTCTCTTTTCTCTCATTTTCTCTTCTCCA CAACCACTCTCTTCATTTCCCTCTCTCTTTCTCTTTCAACTCCCCAACCTCCACTTTCCGTACTATCCAACATGACGGCGATGACGACGACGATGAAGAT GTTGCGGCCGACGATTACGAAGACGAAGAAGAAGAAGAAGAATATGAAGTACAAGATGATGATGATGATGGTGATGACGTTGCAGCTGACGATTACGACG AGGGCGAAGCCTCCGATGGTGACGCGTTCGATGCTCCTGCGAGCGATGGAGCTTTCAAGTGGCAGAGAGTTGAGAAGCTCTGTAATGAAGTTAGAGAGTT CGGCGCTAACATTATCGATGCTGATGAACTCGCTTCCGTTTACGATTTTCGGATTGATAAGTTTCAGAGGCTGGCGATTCAAGCTTTTTTGAGGGGTTCA TCGGTGGTGGTTTCCGCTCCTACGAGCAGTGGGAAGACTCTGATTGCAGAGGCTGCTGCAGTGGCCACGGTGGCGAGGGGGAGAAGGATATTCTACACAA CTCCGCTCAAAGCACTCTCCAATCAGAAGTTTCGCGAATTCCGGGAGACATTTGGTGACACAAATGTTGGCCTTCTTACTGGTGATTCTGCCATCAACAA GGAGGCTCAGGTTTTGATTATGACTACAGAGATATTACGCAACATGTTGTATCAAAGTGTTGGGAATGCTTCTTCTGGAGGTGGACTTTTTCATGTTGAT GCGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGTGGTACAGTGTGGGAAGAGATTGTTATTTATTGTCCTAAAGAAGTTCAACTTATTT GTCTGTCAGCAACCGTTGCAAATCCAGATGAGTTGGCTGGCTGGATTGGCCAGATTCATGGTAAAACAGAGTTGGTAACATCATCAAAACGTCCAGTTCC ACTAACTTGGCATTTTTCTATGAAGAATTCCTTATTACCACTTCTTGATGAGAAAGGAACACGTATGAACAGGAAGCTGTCACTCAATTATTTACAACTT CAAGCTGCAGGAGCTAAACAATACAAGGATGATGGGCCTAGAAAAAGGAATTCACGGAGACGAGGAACTCACACAAGCTATGATAGTGATGGTAGCATGT TTGAGCAACGTTCTCTTTCAAAGAATAACATAAATGCAATTCGTCGTTCCCAAGTTCCTCAAGTAGTTGATACGTTATGGCATCTTCAGTCTAGGGATAT GCTGCCAGCTGTGTGGTTTATTTTTAGCAGAAAGGGTTGTGATGCAGCTGTGCAATACCTTGAAGATTGCAGACTATTAGACGATTGTGAAACAAGTGAG GTTGAGCTAGCCTTGAAGAGGTTCCGCATTCAGTATCCTGACGCTGTCAGAGAAACAGCTGTGAGAGGACTTCTGCAAGGGGTTGCTGCACATCATGCTG GTTGCCTACCTTTGTGGAAGGCATTCATAGAAGAACTATTTCAAAGAGGACTTGTCAAGGTTGTTTTTGCTACAGAAACCTTGGCTGCTGGAATCAATAT GCCTGCTAGAACAGCTGTCATTTCGTCACTTAGCAAAAGAAGTGACAGCGGACATGTCTATTTAAGCTCAAATGAACTGCTTCAGATGGCTGGGCGTGCT GGACGCAGAGGCATTGATGAGCGTGGTCATGTAGTCCTCATCCAAACACCTAATGATGGTGCTGAGGAGGGTTGCAAGGTCTTGTTTGCTGGACTTGAGC CTTTAGTGTCCCAGTTTACTGCCTCATATGGAATGGTATTGAATCTTCTTTCTGGTGTAAAAGCCATTCGGTCAAATGAACCAGATGAAGTGAGACCTTC ATCAGGAAGAACTTTAGAAGAAGCTAGGAAGTTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGCAACGTTATGCTGGCTGCCAAGGAAGAAATTAAA AAAATTAAGAAAGAAATTGAATTGCTGATGTCAGAAATCACTGACGAAGCCATTGATAGAAAAAGCAGGAAGGCTTTATCACAGTGGGAATACAATGAGA TCACGGAGTTACAGGAAAATTTAAGGGCAGAAAAACGTGTTCGGAGTGAATTGCGGAAACAGATGGAAGCAAAGAGAATTTCTGCCCTGAAACCTATACT GGAAGACCCTGAAAGGGAACATCTACCATTTTTGTGCTTGCAGTATAGAGATTCTGAAGGAGTTCAACATTCAATTCCTGCAGCATATTTGGGGAAGGTT GACTCCCTAAATGCTTCAAAACTCAAGATCATGATTTCTTCAGATGATTCTTTTGCGTTAAATTTTTTAGATGAAGAGCCAACAGGTGTTACTGATTCTT CATTAAATAAAAATCTTGAACTATCATATCATGTGGCTCTTGGTTCAGATAACTCCTGGTATCTATTTACAGAAAACTGGATTAAAGCAGTATATGGGAC AGGCTTTCCTAATGTTCCATTGGCTCAAGGGGATGCTCTACCTCGAGAAATTATGAGTACTCTCCTTGATAAGGAGGAAATGAAGTGGGATAAGGTTGCT CAATCCGAACATGGTGGTTTATGGTTCGTGGATGGATCTCTAGAAACATGGTCTTGGAGTTTGAATGTTCCTGTTTTGAGTAGCTTATCTGAAAATGATG AGCTACTTTTAAAGTCTCAAGTCTACCAAGATGCCGTTGAACTTTACAAGAACCAAAGAACTAAAGTTGCACGCTTGAAGAAAAAGGTATCCCGTACTGG AGGGTACAAAGAATATAACAAAATCATAGACGCTGTCAAGTTTACTGAGGAGAAAATCAAACGGCTGAAGACTAGATCAAAGCGCTTGTCTAATCGTATA GAACAAATTGAACCCGCAGGATGGAAAGAGTTTATGCATGTTAGCAATGTCATACATGAAACCAGAGCTTTAGATATTAATACACATGCCATCTTTCCAC TTGGCCAAACCGCGGCTGCAATTCGAGGAGAAAATGAGCTTTGGCTTGCAATGGTTCTTCGCAATAAAAGTTTACTGGAACTAAAACCTGCACAACTTGC TGCAGTTTGTGCAAGTTTAGTGTCGGAGGGTATCAAAGTCCGACCTTGGAAAAACAACAGTTATATTTACGAGCCTTCTGCAACTGTAGTCAATTTCATA AGGTTGTTGGATGAGCAAAGAAAGGTCCTGATGTCAATTCAGGATAAACATGATGTAACAATATCTTGCTGTTTGGATAGCCAATTTTGTGGCATGGTTG AAGCCTGGGCTTCTGGTTTGACATGGAGAGAAATAATGATGGATTGTGCTATGGATGATGGTGATCTAGCTCGCCTCCTTCGTAGGACCATTGACCTTTT AGCCCAGATTCCGAAATTGACAGATATTGATCCTTTGTTGCAGCGCAATGCAAAAGTTGCATATGATTTCATGGATCGGCCTCCAATAAGTGAGCTTGCT GGGTAATAGTAGTGTCTTTGTTCTCCTGTCCTGTGCTCCATTTGTAAATATTATTGTTGTATGATTAATTTCCCTAAATTATTTTCTTCTTCACAAAACC CACTTTTCAGTTAACTTAATTGTTTTTATTATTTTGATCTCTCCTCTTCTTCTTTTTTGCGCATTTTGGTATGTTAACGCAATTTCTGTTAGTGTATTAG TCACTCTTGTCAAAAAAAAATTGTAACCCGGCTATTTTAGAGCTCCATGGTGTTCTTCTTAACAGAATAAGAACATTTTTACTCTATTTTCTATTGTGGG
• Tissue: pods
• Gene name: LI_gene_161745;
• Additional information: details;

Expression of Ll_transcript_339318

FPKM

• PAB: 12.6
• PNAB: 4
• PS1: 3.2
• PS2: 1.5
• PS3: 3.2
• PW1: 2.6
• PW2: 2.8
• PW3: 4.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_339318

• Blastp: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 71.79% of identity
• Blastx: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic from Arabidopsis with 71.79% of identity
• Eggnog: helicase(COG4581)
• Kegg: Link to kegg annotations (AT1G70070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445516.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;