Ll_transcript_339326

• Id Trinity: TRINITY_DN48521_c5_g6_i1
• Name Transcript: Ll_transcript_339326
• Sequence: CTTTTATTCCTGTCTACTTTAGTTTGTCACATATTAGAAAAAACACATTGGTCATCACTTCATTTCTCATATATGGATAAGTTCTTAATCAATTGTTGCG TTGGATATATATATTTTCTTCTTTATTCTCTTTTTCTTGTGCATGGCATAGAATTATCATGCAATCAAACTCCATACCCTCATGTGTGCAAAGATTACAT TGACACTAGTCACACCACCAATAAAATATCATCAACTACCCTAGATGCTTCATCTTCTTATAATTCCTTCCATGATATGGCACTTAAGGTCACCATGGAC CAAGCCATAAACTACTACAAACTTTTCTCAACCATGGAATTGAATAATTTCAAAGATACTCGTGCTAAGTTAGCATGGGATGATTGTTTAGATCTCTATG AGGACACAATTAATCAACTCAACCATTCAATGAGATCAAACAATATAAACAACAAGTTAACTTGGCAAAGTGCAGCTATTGCCAATCATCAAACTTGCCA AAATGGTTTCATTGATTTCAACCTTCCTTCTCACCTAAACTACTTTCCATCCATGTCAACAAACTTCTCCAAATTGCTTAGCAATTCCTTGTTCATTAGT AACACCATCGCTCTGGCATCATCGTCATCACCATCATCATCATCAACGAAACAAGTTGGTGGGAGAAAGTTGCTCTCATCACATGATGGATTCCCTAATT GGGTTTCATCTTCAGATAGAAGGCTACTTCAAGCTACAAGCGCAGGACCTATTAAACCTGATATAGTTGTGGCACAAGATGGAAGTGGTAATTATAAGAC CATATTTGAAGGTGTAGCTGCAGCTTCAAAGTTGAGTGGGAAAGGAAGAATTGTTGTGCATGTGAAAGCTGGAATTTACAAAGAGAATGTTGATATCAAG AAGACAGTGAAGAAGTTAATGATCATTGGAGATGGAATTGATGCTACTATTGTTACTGGTAACCGTAATGCACAAGATGGATTTACCACTTTTCGTTCAG CTACTTTTGCGGTTTCAGGTGAAGGCTTCATCGCCAAGGACATAACCTTCGAAAACACAGCCGGACCACAGAAGCACCAAGCGGTGGCGCTCCGTTCCGG CGCCGACCACTCAGTATTCTACCGCTGCAGCTTCAGGGGCTACCAAGACACCTTATACGTACACACTCAGCGCCAATTCTACCGCGACTGTGACATATAC GGAACCGTAGACTTCATCTTCGGCGACGCCGTAGCGGTTCTTCAAAACTGCAACATTTATGTGAGAAAGCCAATGAGTAACCAACAAAACACGGTCACAG CACAAGGGAGAACTGATCCTAATGAAAACACTGGCATCATCATTCATAATTCTCGTATAACTGCTTCTGGTGACTTGAAATCTGTTCAAAGTAATTTCAA AACGTTTCTTGGAAGACCGTGGCAAAAGTATTCGAGGACTGTGATTTTGAAGAGTAATCTTGATGGTTTGGTTAACGCTTTGGGTTGGGTTCCTTGGAGT GGAAGCTTTGCTTTGAGTACTTTGTATTATGGTGAATACATGAATATTGGAGCTGGTGCTAACACTAAAGGTAGGGTTAACTGGGTTGGTTTCCATGTGA TAAATGCTCCTAGTGTTGCTGTGAAATTCTCTGTTGGTGATTTCTTAGATGGAGATTCGTGGATTCCTGGTAGTGGTGTTCCATTCGATGTGGGGTTGTG AAAAAAAGAAAGAAGATCTCTTGTTAAATACATTATCTCCCGCCAATGAAAATATTTTATGTGAATTAAAAATTTTAAACTTTATTTTCTTCTTATTTTT GTTTTATTATCATTGGTATGAGAGAATATGTCCCATACAAAATGGGATAACATATATAGATATAATGAAAAAAGATTATATTGGAGTTCAAAGAAAAGTG ATTTAGATTCTCTTTTCGTTTTGGACGATAAGACATGGTCATGTTTGAGAGGTAAAAGTTGAGAGTTTCTTATGTGATAAATGTTGGTATATTTGTCATG TAGTTTGTGTTGGGTTTCCCTTTAATAGAGGGTACAAAATATGATATACTTTTGTTGTGTGTTGTATACTTCCCTTGCTTGTAATTTCCTTTTAGAGACC TCAGTTTGTCATAAGGGTACATGATAAATATTAGGAATAAGAATGAATATCTCATGTTCCCATTGGTTTATCCATTTGTATATCAAACCAATCAAAATGT CTTACTTTATTATAAAAATAAAAATATAAACTTATTTTTTTCAAAAA
• Tissue: pods
• Gene name: LI_gene_161755;
• Additional information: details;

Expression of Ll_transcript_339326

FPKM

• PAB: 2.4
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.2
• PS3: 0.1
• PW1: 0.3
• PW2: 0.2
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_339326

• Blastp: Probable pectinesterase/pectinesterase inhibitor 6 from Arabidopsis with 53.15% of identity
• Blastx: Probable pectinesterase/pectinesterase inhibitor 6 from Arabidopsis with 53.15% of identity
• Eggnog: pectinesterase(COG4677)
• Kegg: Link to kegg annotations (AT1G23200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420505.1)
• Pfam: Plant invertase/pectin methylesterase inhibitor (PF04043.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;