| Id Trinity | TRINITY_DN48525_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_337849 |
| Sequence | GGCAAACACTTATTTTTTTGTCAATGATAAACATGGAGATGTCACTGCAGAAATTGGGCCGGCCCAATAACACGCATGAGCAGCCTCATATATAAAACCG ATTGTCGTTAGGGTTCTTCCCCCAAACAAGGTTTTGCATCGCCCACCTTCACCAACAGCAGCAGCCGCAGCTATGGCTCCTAAAAGAGGTGTAAAGGCTC CAGCAGTTGCCAAGAAGAAGACCGAGACTGTTACGAACCCGCTGTTTGAGAAGCGTCCGAAGCAATTCGGAATCGGAGGAGCGTTACCTCCAAAGAGAGA TTTGACAAGATTCGTGAAGTGGCCAAAGACTGTCCAACTTCAGAGGAAGAAGAGGATCCTCAAGCAGCGCTTGAAGGTTCCACCTGCTTTGAACCAGTTC ACTAAGACTCTTGACAAGAACCTAGCAACAAGCCTGTTCAAGATACTTCTGAAATACAGGCCTGAGGACAAGGCAGAAAAGAAGGAGAGGCTTTTGAAAA GGGCTCAGGCTGAAGCTGATGGCAAAACCGTTGAAGCTAAGAAGCCTATTGTTGTCAAGTATGGTCTCAACCATGTTACTTACCTTATTGAGCAGAACAA AGCACAACTTGTCGTGATTGCTCATGATGTGGATCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTGCAGGAAGATGGAAATTCCATACTGCATTGTT AAGGGCAAGGCTCGCTTAGGAACGGTTGTCCATAAGAAAACTGCTTCTGTTTTATGCTTGACTACTGTTAAGAATGAAGACAAATTAGAGTTCAGCAGAG TCCTTGAGGCTATTAAGGTGGGTTTAAATTTAATATATTCTGTTAGATTTTTTGCGGTTTAATGTTCTAGTCTAAAGAGGCCGAGACTCACACGACAATA TGGCTGTTTGACTTGTGATTTGGAGGTCACACCTTCAAATTCTCGAAACATCATTTTCCCTTGTGAGGTATAATATATAACCCTTTTTCATACCCAAATG TTCTAGTCTAAACCCGTTTTTTTGGTTTCCTATTTTCTTTTCAGGCCAATTTCAATGACAAGTATGACGAGTACAGGAAGAAGTGGGGTGGTGGTATCAT GGGCTCCAAATCCCAAGCAAAGACCAAGGCTAAAGAAAGGCTTATTGCCAAGGAAGCAGCGCAACGGTTGAACTAGAAACTTCTGATATTTTAGCTGCTT TTAGGATTGCTTTTTTGTGTTTGTATGCTTGTTTTTTTAATTATATCCTTTGTTAGTTTTCAAAGATGTTTTGTTGGATTGGACCACAAAAACTTTATAT TAAATGAACCCCTTTAATTTCATTGAAATCTCCTTCAAACTCCCTTTAGTTTTTTGAATAGAATAACTCGATCTTTTCCCTACTATAGTTCCCATTGAAG AAATCTTAAACCAGCGAAGCTGGACTAATTCTTCAACCTGTTTCAGATGCAATCTTAAACCAGCGAAGCTGGACTAATTCTTCAACCTGTTTCAGATGCA TCCACAATAGTAGGAGCCATGGCTAAAGCTCTCACACCACAAGAATGCGAAACCTTCATCGATGAATTCCAATCCCATTCCCACAAATTCAATTCTCCTT CTTCCCTCATCGATCAATTTCTCTCTTCTCTTCTCCGCAGAGACTTCCCTCTCTCTCTCAAACTCCAACTCCTCATCTTCCTCGATGAATTCTCCGATCC TTTATTCTCTCCACCGCAACTTCCCTCTCTCATCGACGCTCTCCGATCCCTCCTCAATGCCCCAAACGACGCCGTTTTCATCACTCCCACTCTCAAAGAC CACTTCATGGTTTCCGTCACTTCAATTCTCATCTGCGTTTCACAAAATCACAATCTCCAACCATCGCTACTTCACTCTCTAATAGTCACTTTGGTGGAAC TGTTGTTAACGGTTATTAACCGTCCGAATTTCGGGTCGGATCGACAAACCCGATCCATAGCATGTGAGTGTCTCAGGGAATTGGAGCGGTTTGAACCGGG TTTATTATCCGATGTGGTTGGTCATTTGTGGAGTCTCTGCCAGAACGAGCGAACCCACGCTTATCAGGGTTACTTTCTTCTCTTCACCACTGTTATTCAT AATATTGTAGAGAATAATCTCAACGTTTCGATTCTCAATACCTCTGTTCCTATGGTTCCTTTCAATATGCCGCAGTGTTTGTTGGATTCGGGTTCGAGTT TGAAAGATGTTTCTGTTTTGAATTATAAAGAGTTGAGGAGGGCGTTGTCATTTTTACTTGAATGTCCACAAGTTTTAACTCCTTGTGGGATGATGGAGTT TATGAATTTGATAATACCTATTGCTGTGGCATTGGAATTGCAACCATCCATGCTCAAGGTGCAGTTTTTTGGAATGATTTATTCCTATGACCCAATCCTA TGCCATGTTGTTTTGATCATGTATCTGCGTTTCTTAGATGCTTTGGAGGGTCAAGAGGGGGATGTTTCGGGCCGGCTTTTGTTAATCACGAAAGAGTCGC AGCACCATTTGGTGTTTCGTTTGCTTGCTGTTCACTGGTTGTTGGGTTTTAATCAATTGATTTTTGGGAAACAAGTTGACAAGACCAAGTCCATTGTTGA AGCGCGCTCAAGGTTTTATCCGTCTTTGTTTGATCCACTTGCTTTGAAAGCCTTGAAACTCGATCTTCTTGCTTTTTGTGCGGTGTGTGTTGATGTCTTG AGACTGAAATGTGATTCCCGCGAGGAGGATGAGTTAGTTGATGTGGTGAAGTTGTTTGAAGATGGTCTTGTTTGTGTGTCATCTTTCAAATGGTTGCCTC CCGGGAGCACAGAAATTGCTGTTGCATTCCGCACCTTCCATAAGTTTCTCATTGGTGCATCATCTCATTCTGACAATGATCCTTCTACCACGAGAAACCT ATTGGACTCCATGATATTTCGTACTTTGCAGGGAATGCTTGTGAACGTGATGTTGGAGAGTCGGACCCTGGTTCCTGTTGTTGTTACTTTCATTGACCGT TTACTCTCATGTCAAAAGCATTTATGGCTGGAATTGCTGAAAACCAGACAATACCCCCACATGGGCTGTTAGAGCTGCTCACAAACTTCATGGCATTTCT TGTGGAGAAACATGGCCCAGATACTGGAATGAAATCTTGGTCTCAGGGAAGTAGAGCTCTTGGAATATGTCGAACTATGATGATGCACCACCATAGTTCT AGATTGTTCCTTAGACTTTCTCGTCTACTTGCTTTTACTTGCCTCTGTTTTCCTGATGTGGAAGTTCGTGATAGCTCAAGGATCTATTTACGTATGCTGG TCTGCATTCCAGGGAAGAAGCTTAGAGACATCCTAAGTCTTGGGGACTCGATCCTTGGGATTTCTCCATCTTCAAACCCGAGCTCTTTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_161796; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337849
| Blastp | AP-5 complex subunit beta-1 from Silurana with 28.9% of identity |
|---|---|
| Blastx | 60S ribosomal protein L7a-2 from Oryza sativa with 87.96% of identity |
| Eggnog | endosomal transport(ENOG410YCX3) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454257.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |