Id Trinity | TRINITY_DN48525_c0_g1_i13 |
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Name Transcript | Ll_transcript_337877 |
Sequence | CGAATGTCCAGCCTCACTCGTATATATATATATAAAGATGATTGTAATTAGGGTTCTTCTCTGAAACAAGGTTTTGCATCGCGAATTTGTAGCAGCTATG GCTCCCAAAAGAGGTGTAAAGGCTCCAGTTGCAGCTGCTAAGAAGAAGCCTGTGGCTGAGAAAACGAACCCGCTATTTGAGAAGCGTCCGAAGCAATTCG GCATCGGAGGAGCATTGCCTCCGAAGAGGGATTTGACTCGATTCGTGAAGTGGCCAAAGACTGTTCAAATTCAGAGAAAGAAGAGAATCCTCAAGCAGAG GTTGAAGGTTCCACCTGCTTTGAATCAGTTCACTAAGACTCTTGACAAAAACCTAGCAACCAGCCTGTTCAAGATACTTCTTAAGTACAGGCCTGAGGAC AAGGCAGAGAAGAAGGAGAGGCTTTTGAAAAGGGCTCAGGCAGAAGCTGATGGCAAACCCGTTGAAGCAAAGAAGCCCATTGTTGTGAAATATGGTCTTA ACCATGTTACCTACCTTATTGAGCAGAATAAGGCACAACTGGTTATGATTGCTCATGATGTGGACCCAATTGAATTGGTTGTCTGGCTCCCAGCATTGTG CAGGAAGATGGAAATTCCATACTGCATTGTTAAGGGCAAGGCTCGCTTGGGAACGGTTGTCCACAAGAAAACCGCATCTGTTTTGTGCTTGACAACTGTT AAGAATGAAGACAAATTAGAGTTCAGCAGAGTCCTAGAGGCTATTAAGGCCAACTTCAATGACAAGTATGATGAGTACAGAAAGAAGTGGGGTGGTGGTA TTATGGGTTCCAAGTCCCAAGCCAAGACCAAGGCTAAGGAAAGGCTTATTGCCAAGGAAGCAGCTCAAAGGTTGAACTAGAAGTTTCTTATATTTTTTTG CTACTTTAGGGTTGCTTGTTGGTGCTTGTAAGCTGATTTTAATTATATCCATTTTTAGTTTTCAAAGATATTTTGTTGGATTGACACCTCGGAAGAGTTA TATTAAAATGAACTTTTTGATTTCATTCCTTCATGCCCCCTCAAATCCCAATTACGGTGGGTTTTGTCATTCTTTATTTGTCGACTTTTATATTTTAGAT TGGAGTTTGGAAGAAATCCGGAATGGCCTTTATTTGTTGGATGCAAA BLAST |
Tissue | pods |
Gene name | LI_gene_161796; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337877
Blastp | 60S ribosomal protein L7a-2 from Arabidopsis with 85.38% of identity |
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Blastx | 60S ribosomal protein L7a-2 from Arabidopsis with 88.24% of identity |
Eggnog | (ribosomal) protein(COG1358) |
Kegg | Link to kegg annotations (AT3G62870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454256.1) |
Pfam | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (PF01248.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |