Ll_transcript_337860

• Id Trinity: TRINITY_DN48525_c0_g1_i6
• Name Transcript: Ll_transcript_337860
• Sequence: CGAATGTCCAGCCTCACTCGTATATATATATATAAAGATGATTGTAATTAGGGTTCTTCTCTGAAACAAGGTTTTGCATCGCGAATTTGTAGCAGCTATG GCTCCCAAAAGAGGTGTAAAGGCTCCAGTTGCAGCTGCTAAGAAGAAGCCTGTGGCTGAGAAAACGAACCCGCTATTTGAGAAGCGTCCGAAGCAATTCG GCATCGGAGGAGCATTGCCTCCGAAGAGGGATTTGACTCGATTCGTGAAGTGGCCAAAGACTGTTCAAATTCAGAGAAAGAAGAGAATCCTCAAGCAGAG GTTGAAGGTTCCACCTGCTTTGAATCAGTTCACTAAGACTCTTGACAAAAACCTAGCAACCAGCCTGTTCAAGATACTTCTTAAGTACAGGCCTGAGGAC AAGGCAGAGAAGAAGGAGAGGCTTTTGAAAAGGGCTCAGGCTGAAGCTGATGGCAAAACCGTTGAAGCTAAGAAGCCTATTGTTGTCAAGTATGGTCTCA ACCATGTTACTTACCTTATTGAGCAGAACAAAGCACAACTTGTCGTGATTGCTCATGATGTGGATCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTG CAGGAAGATGGAAATTCCATACTGCATTGTTAAGGGCAAGGCTCGCTTAGGAACGGTTGTCCATAAGAAAACTGCTTCTGTTTTATGCTTGACTACTGTT AAGAATGAAGACAAATTAGAGTTCAGCAGAGTCCTTGAGGCTATTAAGGCCAATTTCAATGACAAGTATGACGAGTACAGGAAGAAGTGGGGTGGTGGTA TCATGGGCTCCAAATCCCAAGCAAAGACCAAGGCTAAAGAAAGGCTTATTGCCAAGGAAGCAGCGCAACGGTTGAACTAGAAACTTCTGATATTTTAGCT GCTTTTAGGATTGCTTTTTTGTGTTTGTATGCTTGTTTTTTTAATTATATCCTTTGTTAGTTTTCAAAGATGTTTTGTTGGATTGGACCACAAAAACTTT ATATTAAATGAACCCCTTTAATTTCATTGAAATCTCCTTCAAACTCCCCTAGACCTGGTGCCTAAATACAGAGGTTGGCTTTGTCATAAACAGTTGGATA CTCATAATTGGCTTAGGAGGCTGGATAAACTCATAAAATAAAAGACTGTTATTCTGGTAGCTCTGACGCAAAATTAGGCCTGCTAAGTTGTAGCAAAG
• Tissue: pods
• Gene name: LI_gene_161796;
• Additional information: details;

Expression of Ll_transcript_337860

FPKM

• PAB: 27.2
• PNAB: 116.5
• PS1: 97.9
• PS2: 88.8
• PS3: 84.3
• PW1: 97.7
• PW2: 72.3
• PW3: 70.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337860

• Blastp: 60S ribosomal protein L7a-2 from Oryza sativa with 86.54% of identity
• Blastx: 60S ribosomal protein L7a-2 from Oryza sativa with 89.5% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (4345279)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454255.1)
• Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (PF01248.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;