Ll_transcript_337862

• Id Trinity: TRINITY_DN48525_c0_g1_i8
• Name Transcript: Ll_transcript_337862
• Sequence: CGAATGTCCAGCCTCACTCGTATATATATATATAAAGATGATTGTAATTAGGGTTCTTCTCTGAAACAAGGTTTTGCATCGCGAATTTGTAGCAGCTATG GCTCCCAAAAGAGGTGTAAAGGCTCCAGTTGCAGCTGCTAAGAAGAAGCCTGTGGCTGAGAAAACGAACCCGCTATTTGAGAAGCGTCCGAAGCAATTCG GCATCGGAGGAGCATTGCCTCCGAAGAGGGATTTGACTCGATTCGTGAAGTGGCCAAAGACTGTTCAAATTCAGAGAAAGAAGAGAATCCTCAAGCAGAG GTTGAAGGTTCCACCTGCTTTGAATCAGTTCACTAAGACTCTTGACAAAAACCTAGCAACCAGCCTGTTCAAGATACTTCTTAAGTACAGGCCTGAGGAC AAGGCAGAGAAGAAGGAGAGGCTTTTGAAAAGGGCTCAGGCTGAAGCTGATGGCAAAACCGTTGAAGCTAAGAAGCCTATTGTTGTCAAGTATGGTCTCA ACCATGTTACTTACCTTATTGAGCAGGTGGGATTTTCTTTTATTGTGTTATGTTTGTAGTTTTCTTTATTTTTTCCTAATTGTTATCTGTATTGATCCTT GACTTGTCGAGCTTTTCCTTTTAGAACAAAGCACAACTTGTCGTGATTGCTCATGATGTGGATCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTGCA GGAAGATGGAAATTCCATACTGCATTGTTAAGGGCAAGGCTCGCTTAGGAACGGTTGTCCATAAGAAAACTGCTTCTGTTTTATGCTTGACTACTGTTAA GAATGAAGACAAATTAGAGTTCAGCAGAGTCCTTGAGGCTATTAAGGTGGGTTTAAATTTAATATATTCTGTTAGATTTTTTGCGGTTTAATGTTCTAGT CTAAAGAGGCCGAGACTCACACGACAATATGGCTGTTTGACTTGTGATTTGGAGGTCACACCTTCAAATTCTCGAAACATCATTTTCCCTTGTGAGGTAT AATATATAACCCTTTTTCATACCCAAATGTTCTAGTCTAAACCCGTTTTTTTGGTTTCCTATTTTCTTTTCAGGCCAATTTCAATGACAAGTATGACGAG TACAGGAAGAAGTGGGGTGGTGGTATCATGGGCTCCAAATCCCAAGCAAAGACCAAGGCTAAAGAAAGGCTTATTGCCAAGGAAGCAGCGCAACGGTTGA ACTAGAAACTTCTGATATTTTAGCTGCTTTTAGGATTGCTTTTTTGTGTTTGTATGCTTGTTTTTTTAATTATATCCTTTGTTAGTTTTCAAAGATGTTT TGTTGGATTGGACCACAAAAACTTTATATTAAATGAACCCCTTTAATTTCATTGAAATCTCCTTCAAACTCCCTTTAGTTTTTTGAATAGAATAACTCGA TCTTTTCCCTACTATAGTTCCCATTGAAGAAATCTTAAACCAGCGAAGCTGGACTAATTCTTCAACCTGTTTCAGATGCAATCTTAAACCAGCGAAGCTG GACTAATTCTTCAACCTGTTTCAGATGCATCCACAATAGTAGGAGCCATGGCTAAAGCTCTCACACCACAAGAATGCGAAACCTTCATCGATGAATTCCA ATCCCATTCCCACAAATTCAATTCTCCTTCTTCCCTCATCGATCAATTTCTCTCTTCTCTTCTCCGCAGAGACTTCCCTCTCTCTCTCAAACTCCAACTC CTCATCTTCCTCGATGAATTCTCCGATCCTTTATTCTCTCCACCGCAACTTCCCTCTCTCATCGACGCTCTCCGATCCCTCCTCAATGCCCCAAACGACG CCGTTTTCATCACTCCCACTCTCAAAGACCACTTCATGGTTTCCGTCACTTCAATTCTCATCTGCGTTTCACAAAATCACAATCTCCAACCATCGCTACT TCACTCTCTAATAGTCACTTTGGTGGAACTGTTGTTAACGGTTATTAACCGTCCGAATTTCGGGTCGGATCGACAAACCCGATCCATAGCATGTGAGTGT CTCAGGGAATTGGAGCGGTTTGAACCGGGTTTATTATCCGATGTGGTTGGTCATTTGTGGAGTCTCTGCCAGAACGAGCGAACCCACGCTTATCAGGGTT ACTTTCTTCTCTTCACCACTGTTATTCATAATATTGTAGAGAATAATCTCAACGTTTCGATTCTCAATACCTCTGTTCCTATGGTTCCTTTCAATATGCC GCAGTGTTTGTTGGATTCGGGTTCGAGTTTGAAAGATGTTTCTGTTTTGAATTATAAAGAGTTGAGGAGGGCGTTGTCATTTTTACTTGAATGTCCACAA GTTTTAACTCCTTGTGGGATGATGGAGTTTATGAATTTGATAATACCTATTGCTGTGGCATTGGAATTGCAACCATCCATGCTCAAGGTGCAGTTTTTTG GAATGATTTATTCCTATGACCCAATCCTATGCCATGTTGTTTTGATCATGTATCTGCGTTTCTTAGATGCTTTGGAGGGTCAAGAGGGGGATGTTTCGGG CCGGCTTTTGTTAATCACGAAAGAGTCGCAGCACCATTTGGTGTTTCGTTTGCTTGCTGTTCACTGGTTGTTGGGTTTTAATCAATTGATTTTTGGGAAA CAAGTTGACAAGACCAAGTCCATTGTTGAAGCGCGCTCAAGGTTTTATCCGTCTTTGTTTGATCCACTTGCTTTGAAAGCCTTGAAACTCGATCTTCTTG CTTTTTGTGCGGTGTGTGTTGATGTCTTGAGACTGAAATGTGATTCCCGCGAGGAGGATGAGTTAGTTGATGTGGTGAAGTTGTTTGAAGATGGTCTTGT TTGTGTGTCATCTTTCAAATGGTTGCCTCCCGGGAGCACAGAAATTGCTGTTGCATTCCGCACCTTCCATAAGTTTCTCATTGGTGCATCATCTCATTCT GACAATGATCCTTCTACCACGAGAAACCTATTGGACTCCATGATATTTCGTACTTTGCAGGGAATGCTTGTGAACGTGATGTTGGAGAGTCGGACCCTGG TTCCTGTTGTTGTTACTTTCATTGACCGTTTACTCTCATGTCAAAAGCATTTATGGCTGGAATTGCTGAAAACCAGACAATACCCCCACATGGGCTGTTA GAGCTGCTCACAAACTTCATGGCATTTCTTGTGGAGAAACATGGCCCAGATACTGGAATGAAATCTTGGTCTCAGGGAAGTAGAGCTCTTGGAATATGTC GAACTATGATGATGCACCACCATAGTTCTAGATTGTTCCTTAGACTTTCTCGTCTACTTGCTTTTACTTGCCTCTGTTTTCCTGATGTGGAAGTTCGTGA TAGCTCAAGGATCTATTTACGTATGCTGGTCTGCATTCCAGGGAAGAAGCTTAGAGACATCCTAAGTCTTGGGGACTCGATCCTTGGGATTTCTCCATCT TCAAACCCGAGCTCTTTTTT
• Tissue: pods
• Gene name: LI_gene_161796;
• Additional information: details;

Expression of Ll_transcript_337862

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0.6
• PS2: 0.7
• PS3: 0.6
• PW1: 0.1
• PW2: 1.3
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337862

• Blastp: AP-5 complex subunit beta-1 from Silurana with 28.9% of identity
• Blastx: 60S ribosomal protein L7a-2 from Oryza sativa with 85.38% of identity
• Eggnog: endosomal transport(ENOG410YCX3)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454257.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;