Ll_transcript_338888

• Id Trinity: TRINITY_DN48526_c0_g1_i12
• Name Transcript: Ll_transcript_338888
• Sequence: GAAAAAGTAGCATAGAAAGAGAAGAAGGCGTAGAGAAGAAAACGAAAGCCGATTCTTGTGCTTATTTGTTTTCTGTATCTTCTCCTTTTTCCCCTACAAA TATGATTTCCCTTCTCACTTTTTCTCCCAACCTTCTCTCCTTTTTTTCTATTTCCCCTTTCTTTCTCTCCATTTTCCAACAACTCTAACCCATTTTTCTT TTCAACCTTCAACCTTTCCTCAGGATTTAGTCCAAAATTCCAGGAACACATATATCTATGGGAGAAGCACCAGCATTTCTTGTTGATGACTTGCAAAATG AGCCTCTCAATGGCTTTGAATTGAAAAATGGAACTTGCAAAACTACTACCACCATTGGTGACAAAACAGTAAGTGTATAATTTATACAACATGCTATGAA GAATTGAAGATTATCTCTATATATTATGTGTTCTTTGTAATTAATTAGATTAGTTAGTACTAGTCAATTTCTGCCTAAAACAAAAATGGGCCTCCATTTG TTTGACAGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTGACCGTAACCTTGGCGAATGGTTAGTTTAAGGTTTCTT AGCTCCATAGCTGTTTTTCTTAATTTTTTGATGCTGATATGCTTTTTTGAACTTCAGGTTTCATCCCACTGTTCATGGTACAAAACCTATGTCATGCAAA GGCCACTCAGCTGTTCTTTTGAAAGATCGAATATTAATTCTTAAGAAGGGTTCCAAACCAGATGATCAGATATGGTTTTTGGAGTTTGATACCCAATATG TTAGGCAACTGCAAAAGAATTTGGGGACTGAGGTTGTTGCTTGGAGTAAGGGTGTAACGGGCAATGCTGAGAAACCTATTGTTATTAGTGGTCCTTCTGG AGTAGGTAAAGGAACATTGATATCGATGCTCATGAAGGAATTCCCAACTATGTTTGGTTTTTCGGTGAGCCACACCACCCGTTCTCCAAGAAATATGGAG AAAGATGGGGTCCATTACCATTTTACTGAGAAGTGTTTAATGGAGAAAGAGATTGAGGATGGGAAGTTTCTCGAGTTTGCTTCTGTCCATGGGAATTTAT ATGGGACCAGTGTTGAGGCTGTTGAAGTGGTAGCTGATGCAGGGAAAAGATGTATACTCGACATTGATGTTCAAGGGGCAAGGTCTGTGAGGGCTAGTTC TCTTGAAGCCGTATTCATCTTTATCTGCCCCCCATCGATGGAAGATCTGGAGAATCGTCTACGTGGAAGAGGGACAGAGACAGAGGAACAGGTCCTGAAG CGATTACGAAACGCCGAGGCTGAGATCAAGGAAGGGAAGTCTTATAAGATATTTGATTTTATCTTATACAATGACAACCTTGAGGAATGTTATGAGAGAC TTAAGAAATTATTAGGACTTGATGGTTTTGTTGCTGCTGCACCTAAATCAGAACCTAGAGAGATTATTCTACCAATGGACCACTCATTGTCAAAGAAAGA TGACAAAATCATCATAAACTGCATACCTTCAGACAAAGATTCAAAGAATTTGATCATGTTGGATGTTTCGTCACTAAAAGGCGGTGCACCCGGACGGACA AGAGGGTTGGATTTTCAAGCCATAAGCTCATTTTCAGAGAGCTTGACCGGGACGAATCAGTTTAGCTAACATTCAATGAACCTTATTCAACTAACTTGGT TTCATGCATTCATATATTACTTCAGAAAAATAGGACATGTGATCATGCATTAGATTCATGTCTTAAACATGTTTTTTTATTTCTATTGTTCTTTCTTTCT AGTGGGGGTTCTTTGATTGTTATGGCAATTCTATTGCTTCTAGGAGTGTTGACAATTTCACAATTATTATTATTTCCCTACACAAGCAATGAAATGATTT AGATTTTTGCCTTTCCAGTTATTGATATTTTCTCTATTTTCTTTCTATATCTCTCTATGCTACACCTTTTGCACCAAAAAAACAAGGTACATCATTTTCT TT
• Tissue: pods
• Gene name: LI_gene_161801;
• Additional information: details;

Expression of Ll_transcript_338888

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.5
• PS2: 0.2
• PS3: 0.2
• PW1: 0.1
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338888

• Blastp: Guanylate kinase 1 from Arabidopsis with 71.94% of identity
• Blastx: Guanylate kinase 1 from Arabidopsis with 63.9% of identity
• Eggnog: Essential for recycling GMP and indirectly, cGMP (By similarity)(COG0194)
• Kegg: Link to kegg annotations (AT2G41880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444086.1)
• Pfam: Guanylate kinase (PF00625.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;