| Id Trinity | TRINITY_DN48526_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_338890 |
| Sequence | CAGGTATTCTATTTTCTACATTCACACTCTCTTTTTCTTCAAGTTTTTATCTTTTTACCATTTCTGATCTGGGTTTTGTTTTCTTTCTTCCTATTCTGTC TACTTTGCTTCATAGGGATATATTGATATTGAATAGAAACCAAGCTTGTTGAGTTATTGTTATACAAATCTCTAGTTTTTTTAACAAGTTAATGGAATCT AGGTTTGTCTCTATTTAAATCTCATTGGGGTATGTTGGTTTTTTTTGTTGTAATGTTTGCCTATTTCAATAAAGTTTCTGTTTTCTATTTTATCTACAAT TTTTGCATATGTTGGTAGATCTTTATTATGACTCTAATCTTTGTTTATGTTTTTTGCTCAGGATTTAGTCCAAAATTCCAGGAACACATATATCTATGGG AGAAGCACCAGCATTTCTTGTTGATGACTTGCAAAATGAGCCTCTCAATGGCTTTGAATTGAAAAATGGAACTTGCAAAACTACTACCACCATTGGTGAC AAAACAGTAAGTGTATAATTTATACAACATGCTATGAAGAATTGAAGATTATCTCTATATATTATGTGTTCTTTGTAATTAATTAGATTAGTTAGTACTA GTCAATTTCTGCCTAAAACAAAAATGGGCCTCCATTTGTTTGACAGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTT GACCGTAGTCACGGCGAATGGGTTCGTCCAACTGTGCATGGCATCAAACCCTTGTCATGCAAAGGCCACTCAGCCGTGCTTTTGAAAGATCGGATACTAA TTCTTAAGAAGGGTTCTAAACCAGATGATCAAATATGGTTTTTGGAGTTTGACACACAGTATGTTAGGCAACTGCAAAATAATTTCGGGAACGAGGTTGT TGTTTGGAGTAAGGGTGTTACAGGCAATGCTGAAAAGCCTATTGTTATTAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATAGCAATGCTCATGAAG GAATTCCCATCGATGTTTGGTTTTTCTGTGAGCCACACCACTCGTGCTCCAAGAAATATGGAGAAAGACGGGGTCCATTACCATTTTACCGAGAAGAGTG TAATGGAGAAAGAGATTAAGGATGGAAAATTTCTTGAGTTTGCTTCTGTTCATGGCAATCTATATGGGACCAGTGTTGAGGCTGTTGAAGTGGTCGCAGA TGCAGGGAAAAGATGTATACTTGACATTGATGTTCAAGGGGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCGTATTTATCTGTCCCCCGTCA ATGGAAGATCTGGAGAAGCGCCTCCGTGGCAGAGGGACCGAGACAGAGGAACAGGTCCTGAAACGGCTTCGAAATGCTGAGGCTGAGATTGAGCAAGGGA AGTCTTCTAAGATATTTGATTTCATCTTATACAATGACAACCTTGAGGAGTGTTATGAGAAACTTAAGAAATTATTGGGCCTAGATGGTTTTGTCACTGC CTCACCTAAATCAGCACCTAAAGAGATCATTCTACCAACCAACCACTCATTGTCAAAGATAGATGACAAAATCATCATAAACTGCATGTCTTCAGAACTA GAAAAGGAATCAAAGAATTTGATCGTGTTGGATGTGTCGTCGCTAAAAGGCGGTGCACCTGGACGGACAAGAGGGTTAGATTTTCAAGCCATAAACTCGT TTTCAGATGGCTTGACCGAGACGGATCAGTTTAGCTAACATTGAATGAACTTTTGTCGACTAATTTGGTTTCCTCCATTCATATAGAACTTGAGAAAAAG GGGACAAGTGATCATGCATTAGATTCATGTCTTAAACATATTTTTTATTTATATCTTGTTCTTTTCTTCATGTGGGGTTCTTTAATTGTTATGGAAACTT AGGATTGTTGGCTACCGCACCATTATTATTCCCTACTCAAGCAATGAGATGAATTTTGATAACTGCTTCTTACTATATTTTAACAAGGCAAATAAAATAT GATTGTTTATCTATATTGTGCAGAGTTCTTTTTTGGATAGAACTTAGAGTATTCATAGTGGTTGTTCTTAACAGAATAAAACATTCTTATTCTCGTCTCC ACCGTGTCATTTTTATTTCTTGAGTTCTGTTCTTAAATAAGATTTAAGAACAATTCTTGTTTGTTCTTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_161801; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338890
| Blastp | Guanylate kinase 1 from Arabidopsis with 72.34% of identity |
|---|---|
| Blastx | Guanylate kinase 2 from Arabidopsis with 66.1% of identity |
| Eggnog | Essential for recycling GMP and indirectly, cGMP (By similarity)(COG0194) |
| Kegg | Link to kegg annotations (AT2G41880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426327.1) |
| Pfam | Guanylate kinase (PF00625.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |