Ll_transcript_336578

• Id Trinity: TRINITY_DN48529_c2_g2_i12
• Name Transcript: Ll_transcript_336578
• Sequence: ATAGAGTGTGAGAGTGTATTGCAGTTGCATTCGCACCAAACCATCACATCTCTCTCTCTCTCTGATCCACTTTATCCTTTTCACTTTCCTCCGATCTCTC TCTCTCTCTCTCTCCGTTTCTCGCTTCTGCAAATTCTAACTTCATCAGGTCTTTGCCAATGGGTTCTAATTCAGCTGTAGATTTGATGGAGAGTACCTCT AAGGTTCATTATTCTGGACTTCACAGTGATGGCTTACAACAAAGAAGGACTGATGCAGAACAATCAATAACGACTTCAGAAACTGGCTTCCATAAACAAC CTTTTATCATAGGAGTTGCTGGAGGTGCAGCATCAGGCAAGACTGCAGTTTGTGATATGATTATTCAGCAGCTTCATGATCAACGAGTTGTACTTGTTAA TCAGGGTTCCTTTTATCATAATTTGACCGAGGAGGAAGTTACAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTGATACTGAGCAATTACTA CGGGTCATGGATAAGTTGAAGCGTGGCCAGGCAGTAGAAATTCCGAAGTATGATTTCAAGGGTTACAAGAATGATGTGTTTCCAGCAAGAAGGGTAAACC CTGCAGATGTTATAATTTTGGAAGGCATTCTTGTCTTTCATGATCCACGTCTTCGGGCATTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGT TCGACTGGCGAGAAGGATTAAGCGTGATACTTCTTTGAAGGCTTGGGATATTGGAGCAGTTCTTGATCAGTACTCTAAATTTGTGAAGCCCGCTTTTGAT GACTTTATTCTTCCTACAAAGAAATATGCTGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCTATTGATTTGATTGTACAGCATATCCACACAA AACTCAGTCAGCACGACCTATGTAAAATATATCCTAATTTATATGTCATTCACTCTACATTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCA GATAACGAAGCATGATTTTGTATTTTATTCTGACCGTTTGATTCGATTGGTTGTAGAACATGGCCTGGGGCATCTTCCATTTACAGAAAAGCAAGTAACC ACACCTACCGGTTCTGTATATAGTGGTGTGGATTTTTGTAAGAGGTTGTGCGGTGTATCCATCATCAGGAGTGGGGAGAGTATGGAGAATGCTTTACGAG CATGCTGCAAAGGTATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGTGGTGACAATGGTCAGCAGCTAATATATGAGAAGTTGCCTAATGATATCTC AAATAGGCATGTGTTACTGTTGGATCCTATCTTAGGCACAGGTAACTCAGCTGTTCAAGCTATTTCCTTACTTTTAAGAAAAGGTGTACCAGAGTCCAAC ATTATATTTCTCAATCTAATATCTGCACCTCAAGGTGTGCATATGGTCTGCAAAAGCTTTCCTAGAATCAAAATTGTGACATCTGAGATTGAGGTTGGCT TGAATGAAGAATTTCGTGTCATACCCGGCATGGGCGAGTTTGGAGATCGGTACTTCGGAACAGATGACGATGATGACCAGCAGGTGGTAGTCCCTTCATA GTACTTCCACAATATTTTTTGGTTCATCATTATTATTGAGATTTTCAAAGGAAAAAAGGTTGAGGTTTGCTGAATTATATTGTGCCGGGAGCTGAGTTTT ATTTTTAAATTCAATTTTGGTCACAATCCTTTGTTTTTCTCTTGGATTTTTTACCAACAGACGCATACTTGGAATGTTCCAAGGCAAATTTGGGGTTATA TTTTGTTATACCAGACTTGGTTATTTGAACTTATTCTTCCCCGGATAATGGCTTCTCAAGATACGTACATGTTTACAAACAAAGATTTACATTACATATA CAAATGAATATATAAATATTTTAATTTGTTGTGTGTACAAGTTTCTCTTCTACACCCAATCTCATTCTCCCCTTTCATAAGACTTTGTTGAAAAGTTTGC CCTATAAAATAAACATCGAG
• Tissue: pods
• Gene name: LI_gene_161825;
• Additional information: details;

Expression of Ll_transcript_336578

FPKM

• PAB: 0.7
• PNAB: 10.7
• PS1: 6.9
• PS2: 8.8
• PS3: 11.6
• PW1: 9.8
• PW2: 18.1
• PW3: 20.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_336578

• Blastp: Uridine kinase-like protein 3 from Arabidopsis with 81.78% of identity
• Blastx: Uridine kinase-like protein 3 from Arabidopsis with 82.3% of identity
• Eggnog: Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (By similarity)(COG0035)
• Kegg: Link to kegg annotations (AT1G55810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435714.1)
• Pfam: Phosphoribulokinase / Uridine kinase family (PF00485.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;