Id Trinity | TRINITY_DN48530_c0_g2_i1 |
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Name Transcript | Ll_transcript_337510 |
Sequence | CCAAACTATCCCCACTCCCAAACGCTCCTTTTCCTTCTTTCCTTCTCTTCCATCCACACTTCCACGTGGCATAATCTCCACCACTATGTCCTGAATCATT TTCCTTCCTTCAACGGAATGGGAGCTTCGCTCTCCACCGCTTCCACCACCGCTTCCGCCACCGCAGGTCCCACTCTCGGCGACATACCGGAGAGTTGCGT CGCCGGCGTTCTCCCTCACCTTACTCCGCCGGAGATTTGCAATTTGGCGCGACTCAATCGAGCGTTTCGCGGCGCCGCTTCGTCAAATTCGGTATGGGAA AGTAAATTACCGTGTAACTACCAACAATTGTTGGATATAATAATGCCTCCTCATCAAAGGTATCAGAATTTGTCCATGAAAGACATTTTTGCATTGCTAT CTCGTCCGCTACCATTTCATGATGGTAACAAGGAAGTGTGGCTGCACAAGGTCACGGGACGGGTTTGCATGTCAATTTCTGCAAAAGCCATGTCAATTAC TGGAATTGATGACCGCAGATACTGGACTTGGATTCCTACTGAAGAATCTAGGTTCAATGTTGTAGCATATCTGCAGGAAATATGGTGGTTTGAAGTAGAC GGGGAAGTCAAGTTTCCATTTCCTGCTGATAGGTATACTCTCTCCTTTAGGATTCACCTTGGACGGTTTTTCAAAAGGCTCGGACGCCGTGTATGCAACT ATGAACAGACCCATGGCTGGGATATAAGACCGGTGAGGTTTGAATTCTCTACTTCAGACGGTCAGCGATCAACTTGTGAGTACTTCTTGGATGAATCTGA ACACATTGATGCCTATGGTGATCATAAACGCAGAAACTGGGTAGATTACAAGGTCGGTGAGTTTATCGTAAATGGATCAGAACCTATAACTGAAGTTAGA TTCTCCATGAAACAGATTGATTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCCGTATTTATTATACCTACAGGTTTGAGAGAGCGCAAAAGGAGCG GCGTCGGCGTCATGAAGTAGCCACGCACGGAGTAGTGAGTTTTTCTAGTGATTTCAGACATCCTAGAACACTATGTTGGGATCCATTATACAAGTTACCC TTGGGAAAGAAATAGAGAGGATTTGCAGGATGTCATCTTTGCTGGGATTTTCTTTCTGGTTGGTATGTGTCCTCTATAGTTTTTGTGATAATCATTTCTA TGTATTATTATATTTAGTATGTTCCATATTGTATATACCTTTGTCAGATGATATTGATAAACAAACTGGAAAACAACCTTCCCTAATACTTTTTTATGAC TACCCTATTCCATGTAAGAGTAGATTTTCCTCACCTCATGTTTTGTGCTTTCTATTAGTGATTGACACAATTTTCTGCAGGGAAAAAGATATTTTAGGTT AATTTTATTTTACCCTCTTGTTAGTAAAATATTAAGAGATGGATTTGGAGTCTTGTCAGCCATCATGTTATTGGCAATATGTCTGGGTCAGATAGTGTTA AGAGTCTCGTATATTTAATCTATAAGGTTCTCCCACCTAATATATTAATCTTTTAGGTTCTCCTCATATGACTTAAGTGTTTCCATTTGGATGTTATTTT GTCCAATTTGTGTCCTTATTTGTGATAGTCTTC BLAST |
Tissue | pods |
Gene name | LI_gene_161830; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337510
Blastp | F-box protein PP2-A15 from Arabidopsis with 70.13% of identity |
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Blastx | F-box protein PP2-A15 from Arabidopsis with 72.24% of identity |
Eggnog | F-box protein(ENOG410YE99) |
Kegg | Link to kegg annotations (AT3G53000) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456732.1) |
Pfam | Phloem protein 2 (PF14299.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |