Ll_transcript_337516

• Id Trinity: TRINITY_DN48530_c0_g5_i1
• Name Transcript: Ll_transcript_337516
• Sequence: CAATCATTCAAATTCATTCTTACCTTTCCGTCCAAATCAGATTCACGCTGTCTCTTATTCACTGTCAGAACCAAACACATTGCACCAACGACTCTCTCTC TCTCACAGCACAACAACAATAACAATAACAAGTGTTTAAATCAAATTGAACCAACCTTTGTTTTTCTATCAAAATCTTTTATTGTTCTTAATGGGTCTTC GTTTTTCTTCTTTTTTCAAACCTTACCCATATCACTCTCCAATTGTTCCTTCCAAACCCACCTTTGAGGATTTACCTGAGAGTTGTGTTGTACTTATCAT GGCTTACATGGATCCTCCTCAGATTTGCAACCTAGCTACGTTGAATCGCACTTTTCGTTCTGCTTCTTGGGCTGATTTCGTTTGGGAATCGAAGCTTCCT TCAAATTATGATGTCATTGTTCGCAAGATTTTTAATGATTTTCCTTGCGATTTGGGTATGAGAGAGATTTATTCAAGGCTTTGTCGTGTCAATAATTTTG ATGGTGGCACCAAGAAAGTTTGGCTGGATAGAAGTTTGGGTAAGATTTGTATGTCAGTATCGGCCAAGGGACTATCAATAACAGGGATTGATGATAGGAG ATATTGGAATCATATCCCCACCGGAGAGTCGAGGTGAGATTCTTCTTCACACTCATCTTAGCTTGTAGAAGTTTTATAGCAATGGGACGTTGGGAACATT TATGTGTGCTATTACCGTGTAGTAGATTACTTATGAAGGCTTTTGAATGATGCTGAGGATATCTTCTCTGGAAATTCCCATAGAAGGTTTTTTGTTGTCT TATTTACTATAGTCTTTGTTGTTTTCAAGTGTCAACTATTGATTTTATGCCTCGGATTGAATAGTTTTAATCATAAAATAGAGAGGAAAATCTATTGAAG CAGAATGTGGAGTGAGAAAAAGAAGTTTAAGAACAAAAAATCTGAATTCTCAGTCTTGTAAACAATCTCTCCACTTAGTGCGAGAATTGCATGAGCAATT ACTTAATACCAAAAACTTTCAAGGACCTTCTTGGTTGAGAATTGTGGATGGTAGGAAGGTGGAAATTTTTTAAAGGAAAACAGTAAGGTGGAGATTTTGG AATACAAATGATTTTATACTTGTGTGGTGCAGCAAGAATATGTGAAGAGAAAAACACATTGCAACTCATTTTCAATTCAGGTTACGGTTTTGGTCGAAAA TCATTTCCACCTTCCATTTTCCACCCACTAAACTAAGCAAACCTGAGGCTTCAGAACTTACAAAATGCAATTATAGCCTCCCCCTTTTAAGACTTGCATC TTTTCAAAAAATTGACTTCTAAAACTACAAGACTCAAATTTTTTTGTTTGGGTGGGTGAGTACATGCTCTGTGTTTCTCTATGTTTTTTCAAGAAACATG GTCTTTGCGATGATAAAATCTTTTCACCCATAGGACCAAGCTTAATGAACTGATCCTTTTCAATTAATTTTTTTGATGAATTAAGCTAAAATGGGACGAT GGTGTATATATGTTCTAGTGCTTTATGTCTTTGTAAATTTGGTGCCTATTTGCATTTTCTCCATGTTCAGTAGTATTCTAGCCGTACTAAAAATGAATGA TATGTTCTAAGTTCTGACTTCACCAATCATGCAAAGTTGTAGCTTGTGGTACTGTTCTCATGTTCTGCACTGGCTTGATTTTATTCTAGACATTGTGCTG TTGTAAAAGGAAATCATGTAGTATTGAACTTGTGTTTCTTTTTCTTTATTACTCTGGTTCATAGTCCCAGTTGTGAAGCTCATAGTCGTAGTTTATTTGT CGAAATAATAAATCTCGTGAAAATGTCTAATCACACCTAAACCGAGCTTTGTATAAATTCACCATCCCTATCATTTTCAGGTTCAGTAGTGTTGCATACC TCCAGCAAACCTGGTGGTTTGAAGTGGATGGGAAAGTTGAGTTCCCATTTCCAGCTGGGAGATATAGCTTATACTTCAGAATACATCTCGGGCGAGCCTC AAAGAGATTCGGACGACGTGTCTGCAACACCGAGCATGTTCATGGGTGGGACAAAAAGCCTGTAAGATTCCAGCTATGGACTTCCGATGGACAATACGTC GCATCACAGTGTTTTCTGAAAGGACCTGGCAACTGGTGCTATTACCATGCAGGCGATTTCGTGGTGGAAGATGGCAATAATGCATCAACAACAGTCAAAT TTTCAATGACCCAAATTGATTGCACGCACACTAAAGGTGGTATTTGCTTAGATTCTGTGCTCATATATCCAAGTGAACTGAAGAAGGTTAAGACATTTTT AAATTACTCTTAACCTTTCTAATAAATATATATTACATATATGAAGTAGATCTTAGGAGAGGATTAGAGGAATAAAGAATCAAGTTTTTAATATGGTTCT TTCAGGCTTAGAATTTTGTAGGAGCCAGAAGGGGATGTAAATAACTAGTATGATGAAGAATATTGTATGCTTTTGGTAGATTGAATGAATATGAAATTTG GATCAAAGTGACTGGAAAATAGTAAAGTGGACCACTTGCTTATTTTTTGGTTGTTATGGAATAAGG
• Tissue: pods
• Gene name: LI_gene_161833;
• Additional information: details;

Expression of Ll_transcript_337516

FPKM

• PAB: 0.8
• PNAB: 0.7
• PS1: 0.2
• PS2: 0.3
• PS3: 0.3
• PW1: 0.3
• PW2: 0.7
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337516

• Blastp: F-box protein PP2-A12 from Arabidopsis with 59.06% of identity
• Blastx: F-box protein PP2-A12 from Arabidopsis with 71.85% of identity
• Eggnog: F-box protein(ENOG410Y934)
• Kegg: Link to kegg annotations (AT1G12710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446610.1)
• Pfam: F-box domain (PF00646.32)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;