Ll_transcript_338947

• Id Trinity: TRINITY_DN48531_c1_g1_i1
• Name Transcript: Ll_transcript_338947
• Sequence: CCGGTTTCTCCCCTGAGACTGAGAGGACTCATTCTCAAATCTCAACCTTGTTGGTATAGGTCAGAAAATTTGGTGTTATTGAATAGTTGACGTAGGCAGC GAAACACGGTTCTCTATCTGTGTGTGTGTATCTGTTTAGTTGAGAGTGCAATTGATATGGATCATAATCATAATCATAATCATAATCATAATCATCCTTA TCATGCTCAATGGCGCTCTATTCGACCATTCCAAGATTCATGTCCTACTTGCTCTTTCTCTCATTTCCCTTTCTGTCCTCTTCCACAACAACCACCACCT CCTCCACCACCGCCCTATTATCACCACCATCCACGGCTCCCTCCTCACCCCTACCCCGTTACTAACCCTAATTACCCTAACCTCGGTGGCGGCGACGGAG GTAGAAACTCGAATAAGAGACTCCGCATCGAGGAGGAGGAGGAGGAGGAGAATGAGCGAAGAAGATTGAAGCTGATTCGAGATCACGGTGTCGCTCTTCC TCATTTGAATTTGAATTCCTCTTATCATCACTTACCTTCACGTTCTTCTAATGGATTTCATTCTATTCTCGATCCTTCTTCTTCATTCTTCATCGCTCCT CCTCCTCTTCCATCTCAACCACAACCTCCTCCTCCTCCTCCGCCACCTCCTCCGTCTCATTCTTCTCACTTCAATCCTACTTCCTCTCCTCTCCCTCCTC CTCCTCCTCCTCCGTCATCATCATATTCACAATCTCGGGCTTATTTTCACGCTAATCCTTCTCCACCTTCTCAATTTCACACTCCAAACCAGCATTTTCA GCAACAACACTCCAAGCATCACTACTCGCCAGATGCTCCTCAATCCTTTTCACTCAACAAGCTGCTTCCTCAGAAACCTAAATTCATGGATGCTTCACAA CTATTTCGCCATCCGCATCGCACTTCCCGTCCCGATCATATTGTTATTATCCTTCGTGGTCTTCCAGGTAGCGGTAAGAGTTACTTAGCAAAGATGTTGC GTGATATTGAGGTTGAAAATGGTGTTGATGCTCCACGTATTCATTCTTTGGATGATTATTTCATGACCGAGGTTGAAAAGGTTGACGAAAATGATGCATC AAAATCTTCAAAGTCAGGCAGAAACAAGAAGCCTGCAACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCGTATCGGTCAAGCATG TTAAAATCATTCAAGAAAACTGTTGAGGAGGGAGTTTTCACCTTCATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAA CTGCAAAGAGGTCGGGGTATGAAGTTTACATTTTAGAAGCTACTTACAAAGATCCTGCGGGTTGTGCGGCCAGGAATGTCCATGGGTTTACACAAGAAGA CATAGAAAAGATGGCTGGGCAATGGGAAGAAGCTCCATCCTTGTATTTGCAGCTTGATGCGAAGTCATTATTTCATGGAGATGATTTAAAGGAAAGCAGA ATCCAGGAGGTAGACATGGATATGGAAGATGATCTTGGTGACGCTTTAACTGCAGTCGAAGGAAGAGAAGCTGAGAAAGTTATTTACCCTCCTATCAGGG TTGATGCAAGTAGTATGCTTTAACCTATTTCTCTTTCTATGGCTATGTTTTACCAATGCTGTTAAATTTTATTTTTTCCGGATGCATCTGATAACTGATG CTTACTTTCTTCACTTTGCACTCCTTACTGTTGGTATGGGATCTAAGGAGCTTGAATATGCAAATCATCTGAATCTGTGTTCCATATTTCTGCGCAATAT AATTAATGTCAACAATGATGTAGTTTGATATGTTTTTCTCTATATAGTATTGGACAAGGCCAGGTGAGCATAGGGTTATAAGGTGCTTTAACCTACTTAA AAAAATGTCTATCTTGACATCTCTTTTTTACTTCTCATATTAAACCTTTTCTCCCCCTTGATTGGATCTGAATACTCGAGCATGGCAAAGGCATTATAAT TTTGTGAGTAGTGACGTAGTGTACAATTGACGTGATATAGATCTCCAT
• Tissue: pods
• Gene name: LI_gene_161837;
• Additional information: details;

Expression of Ll_transcript_338947

FPKM

• PAB: 2.5
• PNAB: 3.3
• PS1: 3.1
• PS2: 2.3
• PS3: 2.3
• PW1: 1.4
• PW2: 1.2
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338947

• Blastp: YLP motif-containing protein 1 from Rattus with 47.3% of identity
• Blastx: YLP motif-containing protein 1 from Rattus with 47.73% of identity
• Eggnog: YLP motif containing 1(ENOG410YIR5)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451155.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;