Ll_transcript_338964

• Id Trinity: TRINITY_DN48531_c1_g1_i13
• Name Transcript: Ll_transcript_338964
• Sequence: CCGGTTTCTCCCCTGAGACTGAGAGGACTCATTCTCAAATCTCAACCTTGTTGGTATAGGTCAGAAAATTTGGTGTTATTGAATAGTTGACGTAGGCAGC GAAACACGGTTCTCTATCTGTGTGTGTGTATCTGTTTAGTTGAGAGTGCAATTGATATGGATCATAATCATAATCATAATCATAATCATAATCATCCTTA TCATGCTCAATGGCGCTCTATTCGACCATTCCAAGATTCATGTCCTACTTGCTCTTTCTCTCATTTCCCTTTCTGTCCTCTTCCACAACAACCACCACCT CCTCCACCACCGCCCTATTATCACCACCATCCACGGCTCCCTCCTCACCCCTACCCCGTTACTAACCCTAATTACCCTAACCTCGGTGGCGGCGACGGAG GTAGAAACTCGAATAAGAGACTCCGCATCGAGGAGGAGGAGGAGGAGGAGAATGAGCGAAGAAGATTGAAGCTGATTCGAGATCACGGTGTCGCTCTTCC TCATTTGAATTTGAATTCCTCTTATCATCACTTACCTTCACGTTCTTCTAATGGATTTCATTCTATTCTCGATCCTTCTTCTTCATTCTTCATCGCTCCT CCTCCTCTTCCATCTCAACCACAACCTCCTCCTCCTCCTCCGCCACCTCCTCCGTCTCATTCTTCTCACTTCAATCCTACTTCCTCTCCTCTCCCTCCTC CTCCTCCTCCTCCGTCATCATCATATTCACAATCTCGGGCTTATTTTCACGCTAATCCTTCTCCACCTTCTCAATTTCACACTCCAAACCAGCATTTTCA GCAACAACACTCCAAGCATCACTACTCGCCAGATGCTCCTCAATCCTTTTCACTCAACAAGCTGCTTCCTCAGAAACCTAAATTCATGGATGCTTCACAA CTATTTCGCCATCCGCATCGCACTTCCCGTCCCGATCATATTGTTATTATCCTTCGTGGTCTTCCAGGTAGCGGTAAGAGTTACTTAGCAAAGATGTTGC GTGATATTGAGGTTGAAAATGGTGTTGATGCTCCACGTATTCATTCTTTGGATGATTATTTCATGACCGAGGTTGAAAAGGTTGACGAAAATGATGCATC AAAATCTTCAAAGTCAGGCAGAAACAAGAAGCCTGCAACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCGTATCGGTCAAGCATG TTAAAATCATTCAAGAAAACTGTTGAGGAGGGAGTTTTCACCTTCATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAA CTGCAAAGAGGTCGGGGTATGAAGTTTACATTTTAGAAGCTACTTACAAAGATCCTGCGGGTTGTGCGGCCAGGAATGTCCATGGGTTTACACAAGAAGA CATAGAAAAGATGGCTGGGCAATGGGAAGAAGCTCCATCCTTGTATTTGCAGCTTGATGCGAAGGTTTGCTATAAATTTGGTATTGTTTGGGTAGAATTG TTTTCATTATTAGGCCATAATATAAGTGTAACTGCCATTTGTATAGTAATGGCTTCTTATTTGTTTCTTTTCTGCTGACTTGACCAGTCATTATTTCATG GAGATGATTTAAAGGAAAGCAGAATCCAGGAGGTAATTGTGACTTTACATATATTATCTTTGGAGCTTCTGTTGCAATTTGAGTGTTACGACCCACTTTC ACATATTCCTTTTGGAGGTTTTTCCGAAAAATGCAAGAAAGTTGTACAACCTTCCTATATATAAAAAATAGCAACCCCCTTGTAGCAGCCTTGGTCAGAA CACCAACTACAAACAGTAAACACAATACGACGAGTTGGCTTTGGGGATGTGGAATTGTGGACATTATGCTATAACCAAATACAACAGTTTGCTGCATAAA CTTCCCATGGCCATTGAATTTTTAGTATTTTTTGCTAGCCAAGACCAAGAATTCCAAAATAAAATAAAATATATTATATCGACCCAACAATGCTAAAATA GATGAACCCTGGCTTCTCACCTAGATCTAGCTCTACATGATAGTCACACAAGGGTAAAGAGCTGCAAGGCTTATAGATAAAGAACATGTCATTTTTAAAT GAAAAATTCTCTGTTTAAGTACCTTAGTGTCTGGCTTCATATGGCATATATTCCAGGTAGACATGGATATGGAAGATGATCTTGGTGACGCTTTAACTGC AGTCGAAGGAAGAGAAGCTGAGAAAGTTATTTACCCTCCTATCAGGGTTGATGCAAGTAGTATGCTTTAACCTATTTCTCTTTCTATGGCTATGTTTTAC CAATGCTGTTAAATTTTATTTTTTCCGGATGCATCTGATAACTGATGCTTACTTTCTTCACTTTGCACTCCTTACTGTTGGTATGGGATCTAAGGAGCTT GAATATGCAAATCATCTGAATCTGTGTTCCATATTTCTGCGCAATATAATTAATGTCAACAATGATGTAGTTTGATATGTTTTTCTCTATATAGTATTGG ACAAGGCCAGGTGAGCATAGGGTTATAAGGTGCTTTAACCTACTTAAAAAAATGTCTATCTTGACATCTCTTTTTTACTTCTCATATTAAACCTTTTCTC CCCCTTGATTGGATCTGAATACTCGAGCATGGCAAAGGCATTATAATTTTGTGAGTAGTGACGTAGTGTACAATTGACGTGATATAGATCTCCAT
• Tissue: pods
• Gene name: LI_gene_161837;
• Additional information: details;

Expression of Ll_transcript_338964

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.4
• PS2: 0
• PS3: 0.5
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338964

• Blastp: YLP motif-containing protein 1 from Rattus with 47.6% of identity
• Blastx: YLP motif-containing protein 1 from Rattus with 48.06% of identity
• Eggnog: YLP motif containing 1(ENOG410YIR5)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451155.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;