Ll_transcript_338966

• Id Trinity: TRINITY_DN48531_c1_g1_i15
• Name Transcript: Ll_transcript_338966
• Sequence: CCGGTTTCTCCCCTGAGACTGAGAGGACTCATTCTCAAATCTCAACCTTGTTGGTATAGGTCAGAAAATTTGGTGTTATTGAATAGTTGACGTAGGCAGC GAAACACGGTTCTCTATCTGTGTGTGTGTATCTGTTTAGTTGAGAGTGCAATTGATATGGATCATAATCATAATCATAATCATAATCATAATCATCCTTA TCATGCTCAATGGCGCTCTATTCGACCATTCCAAGATTCATGTCCTACTTGCTCTTTCTCTCATTTCCCTTTCTGTCCTCTTCCACAACAACCACCACCT CCTCCACCACCGCCCTATTATCACCACCATCCACGGCTCCCTCCTCACCCCTACCCCGTTACTAACCCTAATTACCCTAACCTCGGTGGCGGCGACGGAG GTAGAAACTCGAATAAGAGACTCCGCATCGAGGAGGAGGAGGAGGAGGAGAATGAGCGAAGAAGATTGAAGCTGATTCGAGATCACGGTGTCGCTCTTCC TCATTTGAATTTGAATTCCTCTTATCATCACTTACCTTCACGTTCTTCTAATGGATTTCATTCTATTCTCGATCCTTCTTCTTCATTCTTCATCGCTCCT CCTCCTCTTCCATCTCAACCACAACCTCCTCCTCCTCCTCCGCCACCTCCTCCGTCTCATTCTTCTCACTTCAATCCTACTTCCTCTCCTCTCCCTCCTC CTCCTCCTCCTCCGTCATCATCATATTCACAATCTCGGGCTTATTTTCACGCTAATCCTTCTCCACCTTCTCAATTTCACACTCCAAACCAGCATTTTCA GCAACAACACTCCAAGCATCACTACTCGCCAGATGCTCCTCAATCCTTTTCACTCAACAAGCTGCTTCCTCAGAAACCTAAATTCATGGATGCTTCACAA CTATTTCGCCATCCGCATCGCACTTCCCGTCCCGATCATATTGTTATTATCCTTCGTGGTCTTCCAGGTAGCGGTAAGAGTTACTTAGCAAAGATGTTGC GTGATATTGAGGTTGAAAATGGTGTTGATGCTCCACGTATTCATTCTTTGGATGATTATTTCATGACCGAGGTTGAAAAGGTTGACGAAAATGATGCATC AAAATCTTCAAAGTCAGGCAGAAACAAGAAGCCTGCAACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCGTATCGGTCAAGCATG TTAAAATCATTCAAGAAAACTGTTGAGGAGGGAGTTTTCACCTTCATTATTGGTATGCATCACAAAAGCATGACAGCTAAATTCTCTTAGAACATATGAT TTACAATTAGGGTATTAACCTAGTGTGAGGTCATAGTTTTGCTCTGGATGGGAAATTTTGATTTCTGTCATGAGTTCATAGTGATTTCAGTGACATTGCT TATGTTTATTTCTTGTTAATAGCATTGCACTGAACACTTAGTCATATACTTAATCTTCTCTGATAGATGTGTTTATGTGAAATTACCTAAATCATTGTTC ATTCAGGAAATCAAAAGAAAAAGAAATATTTTACTTAGGTCAATTGAAAAAGCTTAATCATAGAAATCAGGGGAATTGGTTGAGGGCTCTATGATGGCCT GTTATAAAATTTAATTAAAGTTCAATGATGTAGTTTCGTTTTAGATTAAGTGGTGATGCAGTGCCCATGCACTGCCTATTTGTTAACTAACTACAGATGC AGTTTTGTTCGGCAATTGACCCTTTTCTTGGTGGTATTTGTGCCTCGTCTTAGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCA ACTGCAAAGAGGTCGGGGTATGAAGTTTACATTTTAGAAGCTACTTACAAAGATCCTGCGGGTTGTGCGGCCAGGAATGTCCATGGGTTTACACAAGAAG ACATAGAAAAGATGGCTGGGCAATGGGAAGAAGCTCCATCCTTGTATTTGCAGCTTGATGCGAAGTCATTATTTCATGGAGATGATTTAAAGGAAAGCAG AATCCAGGAGGTAGACATGGATATGGAAGATGATCTTGGTGACGCTTTAACTGCAGTCGAAGGAAGAGAAGCTGAGAAAGTTATTTACCCTCCTATCAGG GTTGATGCAAGTTCTTTAAAGGATGAGAAGAGATGGGATACTGAAGGGGAACATCCAACAGAAGCCAGGGAATTGGGTAAAAGCAAGTGGTCAGATGATT TCAGTGAATATGACACTGATCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTTTCTGGGTTAATTCATCATTATGGCAAGGAACGAAAATCTGTACA TTGGGGTGATGAGGTATGATATGTATTTGATGCCCTTGTCTGAAAATCTTTGAAGTATGTTCCAATTTTGTACCTTGGTAGCAAAAATTGCATTTTCCTC TTGAATTTTTTTGGGTTACATAGGAGTTCAATAGATTGTTGTAGTCTTGGAGTGAACCCATGGCATCGGGTACTCCAATAAAGAGTGTGGTCAGTCCCAT GCTTTCTATCTACTCATTAGTGTTTGGTTTTTTAATTTCTAATATTATATATAATATATATATATATATATATATATATATTTCTAGGTGGACTTGTTTT CATCCTTTCTTTACTCTTACTTGCTTGAAGGCCCTGAAATATAGGAAAAAGGGAATGATTTAAACCATTGTAGTTAGGCAGGACTTAGGACTGTATTTCA ACTATTAAGTTTGATGTGTATTGAAACACGGCTAAAAGTAAAACAGTGGTACAACCTGCTTTTGTGGCTCTCTCATTCTATACCGATCTCCTTAAACTCG GCACCCGGCCCCCCTTTCTTTGTAACTATCCTTTCAGGCTGGCCATACTGGGTTTTCAATAGGTGCTGCAAGGAAGGTAAATGCTTTGTCTTTGGTGATT GGACCTGGTGCTGGATACAACCTGAAGTCAAATCCATTACCTGAAGAGGAGAGTTCAAGGCGTAGTAGTGTGGAGCCAAGAAGGCACAGCGTCTTTCAAG AACAAATACGAGCTGAACATGAATCTTTCAAAGCCATTTTTGACAGGAGACGTCAAAGGATTGGTGGACTTGATGTGGAGGAGGAATGACTCAGAATGTT GGTTCACACCATGTAATTCAGACTCACAGGTTAAATCTATACCGCCTTGTGTTGGGCTAATATGGAGATCCAATTGTTAGGTTGGCTGGATAAAGAAAGT GATGTCCCCAACCTTAATTTGTGAAATGATGAATGCCGTTGTAAAATTTTATCCAAAGATTGATGTGGAATATATGACTAT
• Tissue: pods
• Gene name: LI_gene_161837;
• Additional information: details;

Expression of Ll_transcript_338966

FPKM

• PAB: 1.1
• PNAB: 0.4
• PS1: 1.3
• PS2: 0
• PS3: 1.1
• PW1: 0.7
• PW2: 0.7
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338966

• Blastp: YLP motif-containing protein 1 from Rattus with 51.54% of identity
• Blastx: YLP motif-containing protein 1 from Mus with 53.54% of identity
• Eggnog: YLP motif containing 1(ENOG410YIR5)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451155.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;