Id Trinity | TRINITY_DN48531_c1_g1_i5 |
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Name Transcript | Ll_transcript_338951 |
Sequence | CCGGTTTCTCCCCTGAGACTGAGAGGACTCATTCTCAAATCTCAACCTTGTTGGTATAGGTCAGAAAATTTGGTGTTATTGAATAGTTGACGTAGGCAGC GAAACACGGTTCTCTATCTGTGTGTGTGTATCTGTTTAGTTGAGAGTGCAATTGATATGGATCATAATCATAATCATAATCATAATCATAATCATCCTTA TCATGCTCAATGGCGCTCTATTCGACCATTCCAAGATTCATGTCCTACTTGCTCTTTCTCTCATTTCCCTTTCTGTCCTCTTCCACAACAACCACCACCT CCTCCACCACCGCCCTATTATCACCACCATCCACGGCTCCCTCCTCACCCCTACCCCGTTACTAACCCTAATTACCCTAACCTCGGTGGCGGCGACGGAG GTAGAAACTCGAATAAGAGACTCCGCATCGAGGAGGAGGAGGAGGAGGAGAATGAGCGAAGAAGATTGAAGCTGATTCGAGATCACGGTGTCGCTCTTCC TCATTTGAATTTGAATTCCTCTTATCATCACTTACCTTCACGTTCTTCTAATGGATTTCATTCTATTCTCGATCCTTCTTCTTCATTCTTCATCGCTCCT CCTCCTCTTCCATCTCAACCACAACCTCCTCCTCCTCCTCCGCCACCTCCTCCGTCTCATTCTTCTCACTTCAATCCTACTTCCTCTCCTCTCCCTCCTC CTCCTCCTCCTCCGTCATCATCATATTCACAATCTCGGGCTTATTTTCACGCTAATCCTTCTCCACCTTCTCAATTTCACACTCCAAACCAGCATTTTCA GCAACAACACTCCAAGCATCACTACTCGCCAGATGCTCCTCAATCCTTTTCACTCAACAAGCTGCTTCCTCAGAAACCTAAATTCATGGATGCTTCACAA CTATTTCGCCATCCGCATCGCACTTCCCGTCCCGATCATATTGTTATTATCCTTCGTGGTCTTCCAGGTAGCGGTAAGAGTTACTTAGCAAAGATGTTGC GTGATATTGAGGTTGAAAATGGTGTTGATGCTCCACGTATTCATTCTTTGGATGATTATTTCATGACCGAGGTTGAAAAGGTTGACGAAAATGATGCATC AAAATCTTCAAAGTCAGGCAGAAACAAGAAGCCTGCAACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCGTATCGGTCAAGCATG TTAAAATCATTCAAGAAAACTGTTGAGGAGGGAGTTTTCACCTTCATTATTGAGGTCGGGGTATGAAGTTTACATTTTAGAAGCTACTTACAAAGATCCT GCGGGTTGTGCGGCCAGGAATGTCCATGGGTTTACACAAGAAGACATAGAAAAGATGGCTGGGCAATGGGAAGAAGCTCCATCCTTGTATTTGCAGCTTG ATGCGAAGTCATTATTTCATGGAGATGATTTAAAGGAAAGCAGAATCCAGGAGGTAGACATGGATATGGAAGATGATCTTGGTGACGCTTTAACTGCAGT CGAAGGAAGAGAAGCTGAGAAAGTTATTTACCCTCCTATCAGGGTTGATGCAAGTAGTATGCTTTAACCTATTTCTCTTTCTATGGCTATGTTTTACCAA TGCTGTTAAATTTTATTTTTTCCGGATGCATCTGATAACTGATGCTTACTTTCTTCACTTTGCACTCCTTACTGTTGGTATGGGATCTAAGGAGCTTGAA TATGCAAATCATCTGAATCTGTGTTCCATATTTCTGCGCAATATAATTAATGTCAACAATGATGTAGTTTGATATGTTTTTCTCTATATAGTATTGGACA AGGCCAGGTGAGCATAGGGTTATAAGGTGCTTTAACCTACTTAAAAAAATGTCTATCTTGACATCTCTTTTTTACTTCTCATATTAAACCTTTTCTCCCC CTTGATTGGATCTGAATACTCGAGCATGGCAAAGGCATTATAATTTTGTGAGTAGTGACGTAGTGTACAATTGACGTGATATAGATCTCCAT BLAST |
Tissue | pods |
Gene name | LI_gene_161837; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338951
Blastp | YLP motif-containing protein 1 from Rattus with 51.54% of identity |
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Blastx | YLP motif-containing protein 1 from Rattus with 53.54% of identity |
Eggnog | YLP motif containing 1(ENOG410YIR5) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451155.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |