Ll_transcript_338959

• Id Trinity: TRINITY_DN48531_c1_g5_i1
• Name Transcript: Ll_transcript_338959
• Sequence: TTAAAAGTGGTAAGATATATTTGATTTGATGAAGATACAATGGATAAGGATATTTGTTAGATAAGTGGAAGGCTTGAAACATGTAAATGGGTTCATCATC ATCATCATCATCATCAAAATGGGTTCTTCTCATGTTGTTCTTCCCCTTTACCCTCTCCTTCTACCCTCTCCTTTATCTTCCAACAATGACCCTTCTTCTG TTACAACCAATCATAATCATAATCATAATCATACTAATACTGATAAATACAAGCTCACTACCCCAACCATTCGCTCTCGCCTCAGCCTATTATGCCAACA AGGTCAACCTCACCTTGCACGCCACCTGTTCGACACAATTCCTCGCCCTTCCACTGTTCTCTGGAACACTCTCATCATTGGCTTCATCTTCAATCACATG CCTCTCCAAGCCCTCCTCTTCTACTCTCACATGAAGTCCACCCCTTCCACTCTCTTTGACTCCTACACCTTCTCTTCCACCCTCAAGGCATGTGCCCAAA CCCACAACCTTCTCGCCGGAAAGGCTATCCACTCTCACTTTCTTCGCTGCCAGACTAACCCACACCCCAGCAGGATCGTCTACAATTCACTCCTCAACAT GTACTCTACTTGTTTGCCTTCTCTTTCTCCTTTTCCAACCGGGCCTGATTATGTTCTCAACGTCTTTCATGTTATGCGTAAGAGAAATGTGATTGCTTGG AATACACTCATTTCATGGTATGTCAAGACAGACAGGCATGTGGAAGCACTTCGTGCTTTCTCCGCCATGATGAAAGGGGGAATTCTGCCCAGTCCTGTTA GTTTTGTTAATGTGTTTCCGGCTGTCACCAGTATCAGAGATTGTAAGACTTCTCATACGCTCTTCGGGTTGGTTCAAAAACTTGGCGATGACTATGTGAA TGATGCGTTTGTTGTCAGCTCAGCAATGCTTATGTTTGCTGATCTTGGTTTGTTAGATTTTGCAAGGTTGATTTTTGATCGATGTTGTAACAAAACTATA GAGGTTTGGAACACTATGATTGGAGGGTATGTTCAAAGTAACTGTCCGGTGGAAGCAATTAGTGTTTTCATTCAAGCCCTATCCGATGAGGCTGTATGTG ATGATGTAACTTATCTCTCAGTTGTTACTGCTGTTTCACAGCTACAGCAAATAAAATTGACAGAGCAGCTACATGCATTTGTTCTAAAAAGTTTGTCAGT TTCACCGACTGTTGTTGTCAATGCGATTATTGCTATGTACTCGAGGTGCAATTCTGTTGATACATCATTTAAGATTTTTGATAAGATGTCGGAAAGGGAT GCTGTTTCATGGAATACCATAATTTCTGCCTTTGTACAAAATGGTTTAGACGAGGAAGCACTCATGCTTGTGTGCGAGATGCAGAAGCAAAAGTTTATGA TTGATTCTGTTACCATGACTGCTCTTCTCTCTGCAGCTTCTAACCTTAGGAACTCACATGTTGGAAGGCAAGCTCATGCATATCTAATTCGGCATGGGAT AGAATTTGAGGGAATGGAGAGTTATCTGATAGATATGTATGCAAAGTCCAGCTTGATTAGGACTTCGGAATTGTTATTTGAGCAGAACCACCCAGGAGAT AGAGATCAGGCAACATGGAATTCTATGATTGCTGGTTATACCCAGAATGGGCTCAATGAGAAAGCCATTCTCATTCTCAGAGAGGTATTAGTGCACAATG TAATACCTAATGCAGTGACCTTAGCATCAATTCTCCCAGTTTTTACTTCAATGGGAAGCATAGGCTTTGCTAGGCAGCTCCATGGATTCTCCATCCGTCA TTTCTTGGACCAAAATGTTTATGTGGGAACTGCTTTAGTTGACACATATTCCAAGTCAGGTGCAATCAGTTACGCTGAAAATGTTTTTATCAGAACACCT GAGAAGAATTCAGTTACATACACCACAATGATGATGAGCTATGGTCAACATGGGATGGGTAAGAGAGCGCTTATCTTGTATGATTCTATGCTGAGGTCTG GTGTTAAGCCTGATGCAGTAACTTTTGTGGCCGTCTTGTCTGCTTGTAGTTATACTGGTTTGGTTGATGAAGGTCTTCAAATATTTGAGTCCATGGAGAA AATACATAAAATTAGGCCCGCAATCGAACATTATTGTTGTGTTGCAGACATGTTAGGGAGGGTTGGGAGGGTGGTCGAGGCCTATGAGTTTGTCAAGGGA TTAGGTGGGGACGCTAATACAGTGGAAATCTGGGGATCACTTCTTGGGGCTTGCAAAAATCACGGCCACTATGAATTGGGAAAAGTTATTGCTAAAAAGT TGCTCAAAATGGAGACAGAAAAAGGGAAGGCAGGCTATCATGTTTTGCTATCAAATATTTATGCAGAGGAAGGAGAGTGGGAAAATGTTGATAAAGTCAG AAATCAAATGAAGGAAAAAGGTCTGCAAAAGGAAACGGGATGCAGTTGGGTTGAGATTGCTGGGTTTGTGAACTGCTTTGTATCTAGAGATGAGAAACAC CCTCAAAGTGGTGAGATATACTGTATACTGGACAGGTTGACCATGGACATGAAGGATGCTGGGTATAAGCCAGCAACTGAAGTAATTTTGGAATCTAATG AATGAAGTGAATAATTTGCAATATTTATAATGTAAGCAAGCTGTTGGTTGCTTTATGGTGGCCAGCTGTGAAGAAAGTGAGCTATAACTCTTCTGTCTGC TATTACAATAGCCACAGGATTGATGATGATAACTGGTAAAAGTTTCATCCTGTGACACAAGTTTATCTAGTGGTAGCATGACTTGGTTTGTAACACAACA ACCTATTCATGTACAGTATGATTGTGCAGTTGAGTAGTTAAAACTGCACGTAAGGTGATTATCAGTTGGCCCAGATTGTCAATTATGGCTGTCTACGTTT GTGTACAGAGTGGTATGCACCTGAGTCCTGGAAATTCTGGCAAGGGACACCGTATAAAGTAGGCTGGTGAAGTTAAAAACAGGAGCATTTAGGTTAGTTT TAGTTCATGCTTTATGAGTATGTATTGGACTTATGTTTTGCGTCCCAGTGTAAAAGGTTGTAGATTATTTCATGTAGCTTGGTTCCTTTAAAATGGGAGG CACTGAGCCACTGACATGTTCAGCAAAAGGATTAAGTTCCCCATATGACAGATGTTTCTATGATAGGAAGGGGGTGATATGTTGAATTCATTCATTTGAT AATGGAGCTGGGCCTAAGACCAAAAATGTGTTGTTGTACTCTTTCTCAGATAAGGTTGAAACTTGTTACTAAATTATATTTG
• Tissue: pods
• Gene name: LI_gene_161841;
• Additional information: details;

Expression of Ll_transcript_338959

FPKM

• PAB: 5.1
• PNAB: 2.8
• PS1: 4.8
• PS2: 2.6
• PS3: 5
• PW1: 3.9
• PW2: 4.9
• PW3: 6.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338959

• Blastp: Pentatricopeptide repeat-containing protein At3g22150, chloroplastic from Arabidopsis with 61.67% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g22150, chloroplastic from Arabidopsis with 61.67% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G22150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435777.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;