Id Trinity | TRINITY_DN48537_c2_g1_i4 |
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Name Transcript | Ll_transcript_337564 |
Sequence | TGTTAGTAAGAGATAATCATGTGGAATGTTTACTGACATACGTTGGTTCAAGTGGTACATGCTTGATTCCCTTTAAGCAAAGTCGCGGTTCGATCCGTAT GGATGTAAAAAATATCTGCTGAGAGAGTTAGTTTCATATACATATAAGTGGATGTTTCCGGATCGGACAGGATACGAAAAAAAAACACGTGGAATGTTTA GATACCAAATTTGTTGCATTCACGCCTCTTAATTTTACATCAATTTATATTTCCATTCTTCTTTTTCATTCCATCTTATCTTTTTTATTACACTTTCCAA CCATGACAATTCCCTCTTCTAACAATTCTGATGATGATGTCAAGAATGCTATGCCTTCATATTTTAATTTACCAGCACTTGATATCTCTGTGGCATTTCC ACAAGCAACTTCAGCCTCAACATTTCCTCCTTGTGTTTCAGATTATTTTCAGTTAGATGACTTATTGACACCAGAAGAAAAATCCATCAGGAACAAAGTG AGAGACCTTATGGAAAAAGAAATTGCTCCTATTATGACAGAGTATTGGGAAAAGGCCGAATTCCCATTTCAGATTATTCCGAAGATAGGTTCACTGAACA TTGCTGGTGGTACAATCAAGGGTTATGGTTGTCCCGGTCTTTCTGTTACTGGAGGTGCTTTAGCTGCAGCCGAAATTGCTAGAGTTGATGCAAGCTGTTC GACATTCTTTGTGGTCCATTCCTCCTTGGCAATGCTTACTATAGCGTTGTGTGGCTCGGAAGCTCAGAAACAAAAGTATCTACCTTCTTTGGCAAAGCTG CAAACTATAGCATGTTGGGCTTTGACTGAACCTGATTATGGAAGTGATGCTAGTGCTTTGAATACCACAGCAACAAAGGTCCAGTGCCTTTGGCATCTTA TCTAATATTTGCTTCTGCAGCAAGTTTCATTTTGCATCCTTTCGACTTGTCGTCTTAATCGGTTATATTTTCATTTTAACTCAAGTGATCCCAAAGTTCA ATAATGTATTCTTGGTTTGCATTGAAAAGATCAGGTGGAAGGAGGTTGGATCCTTGATGGCCAAAAAAGATGGATAGGAAACAGTACATTTGCTGATTTG TTGGTTATCTTTGCTAGGAATACTACAACAAATCAAATAAATGGGTACATTGTGAAAAAGGATGTACCTGGTTTAACAGTCACAAAAATAGAGAACAAAA TTGGACTTAGGATAGTACAAAATGGAGACATTATTTTAAGGAAAGTGTTTGTCCCTGATGAGGACAGAATAGCAGAACTCAACTCTTTTCAGGACACAAA CAGGGTACTTGCCCTTTCTCGTGTAATGGTTGCTTGGCAACCTATTGGTGCATCAATGGGCATATATGATATGTGTCATAGGTACCTAAAGGAAAGGAAA CAGTTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAAACTTGTTAAAATGCTAAGTAATGTTCAAGCAATGATCCTTGTCGGTTGGCGCCTAT GCAAGTTGTATGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGAAAGTCATGGATCAGTTTGAGGGCTAGAGAAACAGCTGCCCTTGGGAGAGA ATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTTGTGGCAAAGGCATTCTGTGATTTAGAACCTATATATACCTTTGAAGGCACATATGATATCAAT ACATTGGTCACAGGAAGAGAAGTAACTGGATTTGCTAGCTTTAAACCTGCTTCCAATAGAAGTAGAATGTGAAAGTGTAAAACTACTCATCTATAACTCC ACGATCCATTGGTTAATAATTTTTACAACTGTGACAAATAAAAATTCATATGCACTCAATCTTTATACAAATTTTGGTGTATATGACAATATAGTAAAGT AAAAAATAATGATCCTGTATTGGGCATTGAACAATATACAAAAAATAAAACATAGTATTTGCTTTAGTCTTTATGAATGTTACCATGTTTCACTTGTGAT ATGATTATTAAACTTTTGTTTTAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_161879; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337564
Blastp | Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 70.35% of identity |
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Blastx | Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 70.55% of identity |
Eggnog | acyl-CoA dehydrogenase(COG1960) |
Kegg | Link to kegg annotations (AT3G51840) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450332.1) |
Pfam | Acyl-CoA dehydrogenase, N-terminal domain (PF02771.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |