| Id Trinity | TRINITY_DN48537_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_337566 |
| Sequence | TGGAACTCCTAGATTTCATCTAGGAGAGAGAAGACACATAAAAGTCACATTCCTTGTCCACGACTTACCTATAATCATTTGACTCTCTTTCACCTTCGCA TCGATCTTCTTTCTTCTTCACTATCTCTCTCCAACCATGGCAATCCTTTCTTCTTCGAATCGAGATGATGATGTTAAAAATGCGAGGCCTTCATATTTTA ATTTACCACCACTGGATGTTTCTGAAGCATTTCCACAAGCAACACCAGCATCTAAGTTTCCTCCTTGTGCTTCAGATTATTTTCAACTGGATGAACTGTT GACACCGGAGGAGCAGGCTGTTAGGGAGAAAGTCAGAGATTGCATGGAAAAAGAAATTGCTCCAATAATGACCGAGTACTGGGAGAAGGCCAAGTTCCCA TTTCATGTTATCCCAAAGCTTGGTGCATTGGGTGTCGCTGGTGGTACAATCAAGGGTTATGGTTGTCCTGGCCTTTCCATTACTGGAAGTGCTATAGCTA TAGCTGAAATAGCAAGAGTTGATGCAAGCAGTTCAACTTTTGTTTTGGTCCATTCATCCTTGGCAATGCTCACTATTGCATTGTGTGGATCAGAAGCTCA AAAGCAAAAGTATCTACCTTCCTTGGCACAGTTACAAACTATAGCATGTTGGGTACGTTGACATTCTTGCCATGATATAATTTTGATGCAGTGTCCTACT CAAATATGTTATTTTCTTACATTAGGCTTTGACTGAGCCTGAATATGGAAGTGATGCCAGTGCTTTGAAGACCACAGCAACAAAGGTGGCAGGGGGTTGG ATCCTGGAGGGTCAAAAGCGGTGGATAGGAAACAGTACTTTTGCTGATGTGTTGGTTATCTTTGCTAGAAATACCACAACAAATCAGATAAATGGTTATA TCGTAAAAAAAGATACACCTGGCTTAACAGTCACAAAAATAGAGAATAAAATTGGACTTCGAATCGTACAAAATGGAGACATTGTTATGAGAAACGTTTT TGTCCCTGATGAGGACAGAATAGCAGGAGTGAACTCTTTTCAGGACACAAGCAAGGTATCATTGTATATTGTGTTTTACTTGCTTTACTTTCAAGCTTGT TTCAGTAAAAATTACTGCTTTAAGTAGACATTTGTTTATTATACTTATATTACTTGATTAAGCCATATAGCACATCTGAACATTGTTCCTGTGATAGTTT AGAAGCCGCTGCTATACCTTTGTAAGCTTCTGCAATTTTCTTATAGGTTATGAACATCATTATTATTTGTCTACTTTTACAGCCAAGCAAATTTCTTATT CCTATCTCCTTGTATATATCTATCCTTGTATTTGTCTAATCCTCCACCAGATTCTTTCTTCAATTTAAGTCTATAAAATCATATGTATGGTATGCTTTCT GAGAAGTACTGTGGAATGGTCACACATTGAAATTTAAGCACACTGTTTTAAGTTGTAATATCGTGCATGATGAATACATTACTTGCCCTATCATGGATGC AAACCCATGTCTCTTCCTTATGCACATTTTATTTTGTAGAACTCAAAAACACTGGAATTCTAAAAAAATGGCAAAAGATATATTCAAGTATTGAATATTG CTATTCTTTTAGACATTTATCTAATTTGGTTAAGACCCTAAGATGCAGTTATAACCCCTGTATTAATCCTAATTCCATGAGTTAATTTTTTATGTCAGCC ATCTTTGATGCACACGTCTTCATGTAAACATCTGTATTTATTTTAGCCCTCCCTAAACAGGTACTTGCTGTTTCACGTGTAATGGTTGCTTGGCAACCTA TTGGCATATCAATGGGCATCTATGATATGTGTCATAGGTATTTAAAGGAGAGGAAACAATTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAA ACTTGTTCAGATGCTCGGTAATATTCAAGGGATGATTCTTGTCGGTTGGCGCCTCTGTAAATTGTATGAGAGTGGTAAAATGACCCCAGGTCACGCTAGC TTGGGGAAGTCATGGATCACCTTGAGAGCAAGAGAAACGGCAGCCCTTGGACGAGAACTGCTTGGTGGCAATGGTATTTTGGCTGATTTTCTTGTGGCAA AGGCATTCTGTGATTTAGAACCCATCTATACCTATGAAGGCACATATGACATAAACACTTTAGTTACTGGCAGGGAAGTGACTGGTTTTGCCAGCTTTAA GCCGGTTAGTGGAAAAAGTCGATTATGATAATGTAAAACTGTTCCTATATACACTCCATTAGTCTTCTTGGAGTGCGGTTAGTAACACCACTGAGGGGCT TATCAGTTAGGAAACTAATTCCAAATAATATATATTCTCACGAGATAATTTTTCTCCTCCCGTCAATACAAGTATGACACATGTATTATTTTGTTTACTT TTTTAAAACTCATAGATAAGAGTTATCTTTTTTTATATCAGGATACTTTATTCTAAAATAGTAATAAAGGTTCTGTAGAGTTTTGCCATTTATGGTTAAA GATTTTGATTTTGCTAATTAATCATGCTCAGATTTGGGTTATTTATTTTCCTTTTGACGAGTTAATAGTGTAATGTGATAGTGATGATTGGATTTTTATA TTATTAAATTTTGAGTTCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_161880; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337566
| Blastp | Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 76.16% of identity |
|---|---|
| Blastx | Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 76.16% of identity |
| Eggnog | acyl-CoA dehydrogenase(COG1960) |
| Kegg | Link to kegg annotations (AT3G51840) |
| CantataDB | Link to cantataDB annotations (CNT0000977) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446061.1) |
| Pfam | Acyl-CoA dehydrogenase, N-terminal domain (PF02771.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |