Ll_transcript_339129

• Id Trinity: TRINITY_DN48538_c3_g4_i3
• Name Transcript: Ll_transcript_339129
• Sequence: TGAAAATTGAAAAGAGAGTAAGAAAGTGGAGTGAAGAGTTAAATAATAATAATTTTTTTAGATTGTAGATTGATAGTATAGATATTAAATAGATATAAAA TAAAAAAAGAAGAAAAGAGATGAAGGTGGTAGGTGATGGAAAGTGCAATTAGATGGGAAGATAGAAGATTGTTGATATAAGAAAGGGATATTGAAACGGC GGGGGGAGAGAGAGAGAGAGACATTGAAGAAGAAGAAGAAGAAGAAGAAAGAATCGATTAGAGCATGATGATGAGCTTGTGTTTTTGCAGTGTCACTCCT ATTCATATCAAATACAATAACAACAACACTCTTTCTTCTTCTCTTTCACTCACCACTCCTTCCTCTTTTCCTTCTTCCTCCATTTCTTCTTCTCGCTCTA TTCTTCCTATGATTGTGAGAGCAAAGACAGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCGTATTCATATCCATAATCCCATTCCCCCTCTCAA CATCATGATCTCTGGAGCTCCTGCTTCTGGCAAAGGAACTCAATGCCAACTCATCACCCAAAAGTATGGCTTGGTTCATGTTGCTGCTGGAGATTTACTG AGGGCTGAAATCTCTACTGGTAGTCCAAATGGGAAGCTCGCCAAAGAATACATGGAAAAGGGAGAATTGGTCCCTGATCATATTGTTGTCTCAATGGTCA AGGATCGACTCAACCAGCCCGATTCCATTCGCAATGGTTGGCTTCTCGATGGCTATCCCAGGAGCTTATCCCAGGCCACTGCTCTTCACCAATTCGGTTT CCAACCTCATCTTTTTATCCTTCTTCATGTCTCTGAGGATATTCTCGTCGACAGAGTTGTTGGTCGCAGATTAGATCCTCTTACTGGCAACATTTATCAC TTACAGTATTCTCCTCCAGAGACTCAAGAAATTGCAGCCAGGCTTACCCAACGTTTTGATGATACTGAGCAGAAGGTCAAGTTGAGACTCAACACACATC ATCAAAATGTGGAGGCTGTACTTTCCTTGTACAAAGATATAACCGTTCAGGTATCCATGCTTTTATTACTCTCCAATGATTGGACTAGACAACTTACTTA ACTCTCCATTCTATAGTATAAAACATCCTTATTCTTGTGGAAAATATATTGTTTAAGTTTCCAGGGCATGGACATGAACAAAAACAAAGCTAATTCACTT ATGCGTATTTGAATTATATAGCATTTGATGCATGCAGACATTGGAACACTTGTATTGGTTGATAGTTTTATGTTGCTTAACTGCTTTACACTTCATTGTT ATGTTTGTTCAACTGTTTTTTGTTTGGTGTTCATCAAAATCTCCCTAGTGCAAAATCAAACATATAGGAAAGTTTTATTTCGGTGAACCCCAGCTAAAGT TCTTTTGTTGTCTTGAGGTTGATGGAAATGTCTCAAAGGAAGAAGTATTTGCCCAAATTGATAGTGCATTGACAACTCTTTTGGAGAAAAGGAAGGCTGC TTCAGGATCTGTGACAGCATAGAAGAGCATCTTTTGATATTTAGATCTACCATGCTGGAGGTAGTGGATTTTAAGCATTATTTATTTATTGAGCGGAGAG TCCTTAATGCAACTTGAAGATTCATTTTCTCATGAGGGGATTGATCCGTTGAAAATGTCTCATCCATTATAAAATGCAGTGTGATGGGCTTCATCCATGC ATGAGGACTTGTGATAGTAAGGTTGTGCAGATACTATACTTTATGATTTAAAATTAAAAAAAAAATGATTAATTTAGCATCATTTTTATGCAATAAATAA TGAGATTAAAGCTTGATTGTTGTTTAAAATCATTTTTATGCAATTACTAGCTTGTAAATGGAAGGTTTAGTGAACTATTGTTTGTTGATTCTTGTTATGT TGTGTGTCCTATATGATTTTCTGTATATTGATTGATGATTGAAGATCGTGTATTCTATAAGACGAAAGAAAGAAGAAAAGCCATTGATTCTCTTTGGTAC TGTAAAA
• Tissue: pods
• Gene name: LI_gene_161891;
• Additional information: details;

Expression of Ll_transcript_339129

FPKM

• PAB: 5.6
• PNAB: 2.9
• PS1: 2.7
• PS2: 2.8
• PS3: 5.3
• PW1: 2.6
• PW2: 3.5
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_339129

• Blastp: Adenylate kinase 2, chloroplastic from Arabidopsis with 75.94% of identity
• Blastx: Adenylate kinase 2, chloroplastic from Arabidopsis with 75.69% of identity
• Eggnog: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity)(COG0563)
• Kegg: Link to kegg annotations (AT5G47840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412833.1)
• Pfam: Adenylate kinase (PF00406.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;