Ll_transcript_339143

• Id Trinity: TRINITY_DN48538_c3_g7_i2
• Name Transcript: Ll_transcript_339143
• Sequence: ATCACCTATTACTCTATTACTCCCTCTATCTCATTCTTGCCTTCTCCATAAAATGGATGCTTGTGCTATGCTCACCGGTGCCACCAATAATATTATTATT AATAATAATAATAATAGTGAAGATGCCAATATCAACAATGGTGGTAGTCCTTTGACCAGTGCCTCTAATACCTCTAGTAAATTCAGCAGTGAAGACCGCT CTCACACTCACACTCACCAGCTACATCATTCTCATTCTGGACAAAGGAAAATGGTGAGAAAGAGGATGGCTTCTGAGATGGAACCTACTCATACCATGCT GCCACATGCTGCTGTTGGTAATAGGTTTCCTCGTCGAGCCAACAACAACGATAACATGTCATCACTACTAATTAATTCTTCTTCTTTATCTCCAACTAGT TTTGATAACAACTATCATTATAAAACTACTTCTTCTTCAAGAGTAGATAATAACGTCGCTGTTGTGCCAAACCCCACTACTCCCAACTACTCCACTATGC TACTACCCTCTTCTTCTTCTTCTTCTTCTACAACCATCAATCCCAACTATCACATTAGTCAGAGGCAGCAACAGGATCAGAATCAACTTACATCACCTGC AGTGTGTGGATTCTCGGGTTTACCCCTCTTTCCTGCATCTCAGCAAAGAAATCACCATCACAGTAGTACTGGTACTGGTGCTAATGTTGAGGTGGCTGCT TCTCCTTCCATGGAAGACAATAACAACAACAACTCAGCAGCCACTGCTTGGATCGATGGTATATTGAAGGATCTTATCCATAGCTCCAACAGTGTTTCCA TTCCTCAACTCATCAACAACGTTAGAGAGATTATATATCCTTGCAACCCCAACCTCGCTGTTGTTCTTGAATACAGGCTGCGTCTTCTCACCTCTCATGA CAACACCACTGCTGCTCCAAACAACGACTCATCTAACTCCGCAGCACTTGGAAAAAACAGTAGTACCGAAGTGGGAGTGGGAGTGGGAGTGGTTTTGAAC CAAAACCAGAGGCCCTTACCCTCAACTACCACCACTGTTAATGTTATACCTGATAACTTCCCACCAGATTCATCAGGCGCTGCTCCTGTAGTTATGAATC AGATGTTGTCCAATTGGGTTGTGCTTCCAATCACCCATGACGGAACTTCTTCAGTGGTTGCTACTGCTTTACCAACTCATCAAGAGGAATGTTGTGATGT TGTTGCTACTGCACCAGACACAAGAAGAAAGAAGAAAGAAGAGATGCGGCAACAGAAGAAAGACGAAGAGGGCTTGCACCTGCTCACTTTGCTGCTTCAA TGTGCAGAAGCAGTTTCAGCTGAGAATCTTGAAGATGCTAACAAGATGCTGCTAGAGATTTCCCAGCTATCAACGCCATTCGGTACATCAGCGCAGCGAG TAGCAGCTTATTTCTCAGAAGCTATATCAGCAAGGCTAGTGAGTTCATGTTTGGGAATATATGCGACCTTGCCTTCAACACTGGTGTCCCACAGTAATCA CAAAGTAGCATCAGCATACCAAGTGTTCAACGGGATCAGTCCATTCGTGAAGTTCTCGCATTTCACAGCCAACCAGGCAATACAGGAAGCATTTGAGAGA GAGGAGAGGGTACACATAATAGATCTAGACATAATGCAAGGGCTTCAATGGCCAGGACTGTTTCACATTCTGGCTTCAAGACCTGGTGGGCCCCCTTATG TTAGACTCACTGGGCTTGGCACTTCAATGGAGGCACTTGAGGCAACAGGGAAGCGTTTGTCTGACTTTGCTAACAAACTTGGTCTTCCTTTTGAGTTCTC TCCTGTGGCTGATAAGGTTGGAAACCTTGACCCTGAAACACTCAATGTTAGTAAAACAGAAGCTGTTGCTGTCCATTGGTTGCAACATTCCCTCTACGAT GTCACCGGCTCTGATACCAACACCTTGTGGCTTTTGCAGAGGCTGGCACCTAAAGTGGTGACGGTGGTAGAGCAGGACCTGAGTAACGCAGGGTCCTTCC TGGGAAGGTTTGTGGAAGCAATACACTACTATTCAGCACTATTTGATTCTCTTGGGTCAAGCTATGGAGAGGAAAGTGAGGAGAGACATGTGGTGGAACA ACAACTACTGTCCAAAGAGATTCGTAATGTTCTTGCAGTTGGGGGGCCATCAAGGACAGGAGACCTCAAGTTCCATAACTGGAGAGAAAAGCTTCAGCAG TGTGGGTTTAGAGGTATCTCACTATCTGGTAATGCTGCCACTCAAGCCAGCTTACTCCTTGGCATGTTCCCATCTGAGGGATATACCCTTGTGGAGGACA ATGGTATCCTTAAACTTGGTTGGAAAGACCTTTGCTTGCTCACTGCTTCTGCTTGGAGACCTCCCTTCCACACCACTACCCTCATTCTCCATCATTAATA TTCTCTCATGCATGCCCCTTACCATTTCTAACTCAAATTCCTCTCTTCAATACTCTCAACAACTAAAAAACACATTACTACACCCTACATTTGTTT
• Tissue: pods
• Gene name: LI_gene_161894;
• Additional information: details;

Expression of Ll_transcript_339143

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.2
• PS2: 1.3
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_339143

• Blastp: Protein SCARECROW from Pisum with 62.44% of identity
• Blastx: Protein SCARECROW from Pisum with 92.62% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462155.1)
• Pfam: GRAS domain family (PF03514.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;