| Id Trinity | TRINITY_DN48538_c3_g7_i3 |
|---|---|
| Name Transcript | Ll_transcript_339144 |
| Sequence | ATCAGAACCAACTTGCAGCACCAGCAGAGTGTGGATTCTCGGGTTTGCCCCTTTTTCCTGCATCTCAACAAAGAATTCATCATCACAATAGTACTAGTAC CAGTGCTAATGTTGAGGTGGCTGCTTCTCCTTCCATGGAAGACAATAACAACAACAACTCAGCAGCCACTGCTTGGATCGATGGTATATTGAAGGATCTT ATCCATAGCTCCAACAGTGTTTCCATTCCTCAACTCATCAACAACGTTAGAGAGATTATATATCCTTGCAACCCCAACCTCGCTGTTGTTCTTGAATACA GGCTGCGTCTTCTCACCTCTCATGACAACACCACTGCTGCTCCAAACAACGACTCATCTAACTCCGCAGCACTTGGAAAAAACAGTAGTACCGAAGTGGG AGTGGGAGTGGGAGTGGTTTTGAACCAAAACCAGAGGCCCTTACCCTCAACTACCACCACTGTTAATGTTATACCTGATAACTTCCCACCAGATTCATCA GGCGCTGCTCCTGTAGTTATGAATCAGATGTTGTCCAATTGGGTTGTGCTTCCAATCACCCATGACGGAACTTCTTCAGTGGTTGCTACTGCTTTACCAA CTCATCAAGAGGAATGTTGTGATGTTGTTGCTACTGCACCAGACACAAGAAGAAAGAAGAAAGAAGAGATGCGGCAACAGAAGAAAGACGAAGAGGGCTT GCACCTGCTCACTTTGCTGCTTCAATGTGCAGAAGCAGTATCAGTTGAGAATGTTGAAGATGCCAAGAAGATGCTCCTTGAGATATCCCAGCTATCAACA CCATTCGGCACATCAGCGCAGCGAGTAGCAGCTTATTTCTCAGAAGCGATATCAGCAAGGCTAGTGAGTTCGTGTTTGGGAATATATGCGATCTTTCCTT CAACGGTGGTGTCTCACAAGGTAGCATCAGCATACCAAGTGTTCAACGGGATCAGTCCATTCGTGAAGTTCTCGCATTTCACAGCCAACCAGGCAATACA GGAAGCATTTGAGAGAGAGGAGAGGGTACACATAATAGATCTAGACATAATGCAAGGGCTTCAATGGCCAGGACTGTTTCACATTCTGGCTTCAAGACCT GGTGGGCCCCCTTATGTTAGACTCACTGGGCTTGGCACTTCAATGGAGGCACTTGAGGCAACAGGGAAGCGTTTGTCTGACTTTGCTAACAAACTTGGTC TTCCTTTTGAGTTCTCTCCTGTGGCTGATAAGGTTGGAAACCTTGACCCTGAAACACTCAATGTTAGTAAAACAGAAGCTGTTGCTGTCCATTGGTTGCA ACATTCCCTCTACGATGTCACCGGCTCCGACACTAATACCTTGTGCCTTTTGCAGAGGCTGGCACCTAAAGTGGTGACGGTGGTAGAGCAGGACTTGAGC AACGCAGGATCATTCTTGGGAAGGTTTGTGGAAGCAATACACTACTATTCAGCACTATTTGATTCTCTTGGGTCAAGCTATGGAGAGGAAAGTGAGGAGA GACATGTGGTGGAACAACAACTACTGTCCAAAGAGATTCGTAATGTTCTTGCAGTTGGGGGGCCATCAAGGACAGGAGACCTCAAGTTCCATAACTGGAG AGAAAAGCTTCAGCAGTGTGGGTTTAGAGGTATCTCACTATCTGGTAATGCTGCCACTCAAGCCAGCTTACTCCTTGGCATGTTCCCATCTGAGGGATAT ACCCTTGTGGAGGACAATGGTATCCTTAAACTTGGTTGGAAAGACCTTTGCTTGCTCACTGCTTCTGCTTGGAGACCTCCCTTCCACACCACTACCCTCA TTCTCCATCATTAATATTCTCTCATGCATGCCCCTTACCATTTCTAACTCAAATTCCTCTCTTCAATACTCTCAACAACTAAAAAACACATTACTACACC CTACATTTGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_161894; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_339144
| Blastp | Protein SCARECROW from Pisum with 69.94% of identity |
|---|---|
| Blastx | Protein SCARECROW from Pisum with 67.4% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462155.1) |
| Pfam | GRAS domain family (PF03514.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |