| Id Trinity | TRINITY_DN48539_c7_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_339243 |
| Sequence | TTTGAATTTCTTCTTCTTCTTCTTATATGTCTCAACTTGTCTCTCCCTCCACTGCATGAGGAGTATTCAAACACTTCTCAAACGACGTCGTATTCATCAC TAGACCTAGTTTTCTTCATTTCATTGCATTCTCTTCATTCATGGCTTCTCCTTCTCCTCGCAATCGCATTCATAAGTTTTATGCTTCAAAGAAAAGGAAA GCTGTGTCACCTGTTGCTAAAGTTGGGAAATCTGAAAAAGGTGCAAGACATGGGGGTGATGGTTCTCCAAGTGCCAAAGGTACTTTGGACAGTTACTTGG TTGCATCGCAGGATGATTGTAATGCCGCCAGGCTATCAAACATGCCCTCTGATTCTTTGACTAGGCAGGATTTGGTTAAGAGAAATTTAGCACTAGAGAT TAATAGTGCTTCTGACAATGAACTTGATAAGCCGCCCGTTTATTCGGTTCGAGGGCATCAAGACTTTGAAGCTAATCAGCTGAGACTAATAAATGAATTA CCCAAGGCGAGTGGCATGGAAGTTGAAGACCCTGTACAGGAAAACAACTGCAATGATTTCAAGCAGGGTGCAGTGAAGTCAGAACTCAAACAGTTCGCAG AAGACTTTTTGTCCTTGTATTGCAGGTACATGACTCTATCTATTTGAGAAATTGTATCTCTTTGTGAGCATCAAGTTTTGCATTGTAGTGGAGATACACA ATCTTTCCCCACCGGGCGACGGGTAGAATCCTTTGCAGACGACTTAAATACGTGACGGAGTATTGTAAGTGGCAGAGTGACCTTGCTGCCACGATCTACT GAGATTCAGCCATTGTCGCTTTGATTCGTTAAAAAAAAACACAATCAGGAACTGTTGCAGGTTAATTTATTTTTTCTGTCTTCTTTTTTTATTCACCTAT TTCTAACATTAAACTATACCACATGCAGTGATTTACGTCCGAGCGTTAATTCACCTTCCGAGATGAAAGTGAATGACCATAAAAGACATGATTTCATGAC ATTAGAAGTGGAAAGTAATAGTCTAGCACAGAAGTTTAGTGACACTGGTAAATGTGGTGAAAACATCTCCAGTGCAAAGATCCCTGAAGACATCAAGTCT GGTGCAGTTGGTAATACTATGGCTATGGCATATGTTTCTTGCTGTTCAACAAAGGTTTCTGGTGGTGGTGATGCTATTGCTCTTGACACAAGCTTGAGAA AATGTAGTTATACACCTAAATCACCTAAGAATATGGCTGCATATTGTACGCCGGGATCTTTGATTGTTAAAACACATGTTAAGGAGACTCCAAAGTCAAC ACGTGGAAGCTCAATGTTTTCACCTGGAGAGGCTTTTTGGAATGAAGCAATTCAACTTGTTGATGGTTTGTCTGTTCCCATGGCTAATGGCTCTAAGGAT AATGTCATGGAGGAGCGGCTTGAGATGGAGAGCTCATGTAATGTACAAAATTGTGATGGGAAGCCAAGGAAAATATTTGATGAAAGTAAAAGCAGACTCT GGAATACTGAAATGAGTACTTCACAAGGGTTGGTTGGGATGCACACAAAAGATCCATCGAAAGAAGAGTCCAGGCTTCCTGTTAAGCATTTTGATTTTTC GTGTGAGGACAGTAATTTGGATGAAAATACTATGCAAAATTGTTCTGCTGGTAATCTGACCAATATTAATTGTGGGACTGGCAGAGGGTATAAATCTGGT TCCTTGAAAGGTCATATGCATGGGAAGATGAATGAAGAGCAACAAGAGATTTTAGTAGATGCAGTATGCAAAAGAGTGAATTTCTCAAGTCAGGATAATG TAAGTATGGCATTTAATTCACCCCTCTATGATGCTAGGACAGCCATTAGAACACATGCTTCTGATGAAAGTACTCCTTCGAGTGGTGTGTCACTTAATGA CCATTTAGACCTAAACAGTTGGCTTCCACCTGAAATATGCAGCATATATAGAAAGAAAGGAATCTCAAAGCTTTACCGTTGGCAGGTTGATTGCCTTCGG GTGGATGGTGTCCTACAAAGAAGAAATCTTGTATATTGTGCTTCTACAAGTGCGGGTAAGAGTTTTGTTGCTGAGATTTTGATGTTGCGGAGGGTGATAA CTACCGGAAAAATGGCACTACTTGTTCTTCCATATGTTTCAATTTGTGCAGAAAAGGCTGAACACCTTGAACGTCTTCTCGAGCCACTCGGTAAACATGT TCGTAGTTATTATGGCAACCAAGGTGGTGGGACTCTTCCTAAAGACACTTCTGTAGCTGTCTGCACAATAGAGAAGGCAAACTCGTTGATTAATAGATTA TTGGAAGAGGGACGTCTATCAGAAATGGGAATTATTGTGATAGATGAACTGCATATGGTCGGAGATCGAAGTAGAGGTTATCTTTTAGAGCTTATGTTGA CAAAGCTTCGTTATGCAGCAGGGGAAGGTATTTCAAAATCAAATTCTGAAAGTTCTGGTGGAAGCAGTGATAAAGCTGATCCTGCTCAAGGTCTGCAAAT TGTTGGAATGAGTGCAACAATGCCAAATGTTGCAGCAGTTGCTGACTGGCTTCAAGCAGCATTATATGAGACTGAATTCCGGCCAGTTCCTTTAGAAGAA TATATAAAAGTTGGGAATTGCATTTATAACAAGAGTATGGAGCTCACTAGAACAATATCAAAAGCAACTGACCTTGGTGGTAAAGATCCAGATCACGTTG TTGAACTATGTAATGAAGTTGTTCAAGAGGGACAGTCTGTGTTAATATTTTGCTCTAGCCGAAAGGGTTGCGAATCAACCGCAAGACATGTTGCAAAGTT CCTTAAAAGCTTTATTCCTGATGTTCTTGAGAAAGATTGTGAGTTTGCTGATATTAATGCTGCCATTGATTCCTTGAGAAAGGCCCCTGCTGGGTTGGAC CCCATATTAGAGGAAACCCTTCCTTCTGGTGTTGCATTTCACCATGCTGGCCTTACGGTTGAGGAACGAGAGATTATTGAGACCTGTTATCGAAAAGGCC TTTTACGTGTCTTAACTGCCACATCGACCTTAGCAGCTGGGGTTAATCTGCCTGCTAGGAGGGTGATTTTTCGCCAACCTAGAATTGGTCGTGATTTTAT AGATGGTACAAGGTACAAGCAGATGGCTGGTCGTGCTGGACGAACTGGAATTGATACAAAAGGAGAAAGTGTACTTATCTGTAAACCAGAAGAGATTAAA AAAGTTACAGGACTTCTTAATGGAAGCTGTTCACCATTGCATTCCTGTTTATCTGAAGATATGAATGGAATGATTCATGCAATCTTAGAAGTTGTGGCTG GAGGAATAGTTCAAACTGCAAGTGATATTCATCGGTATGTTAGATGTACTCTTTTGAACTCCACAAAACCATTTGAAGAAGTGGTGAAATCTGCACAAGA ATCCCTTAAATGGTTATGCCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTACAGTACCACACCTCTAGGGCGTGCATCTTTTGGAAGCTCT CTCTGTCCAGAAGAATCACTTATTGTGCTAGCTGATATTTCAAGGGCAAGGGAAGGATTTGTCCTTGCATCTGACTTGCATATAGTTTATTTGGTGACAC CAATCAACGTTGATGTTGAGCCAGATTGGGAATTGTACTATGAGCGTTTCGTGAAATTGTCTCCTCTTGACCAGTCAGTTGGGAACCGAGTAGGTGTTAC AGAACCATTCTTGATGCGTATGGCACATGGAGCACCGGTACGAGGTTCAAACAAGTCAAGAGATAATACAAGATGGTTGCACAATACAAGAGGAAATCAA CTTGGGATCTCCAGTGGAACAAGTAACTCGGATGATCACACACTTCGTGTCTGTAGAAGATTCTATGTTGCTCTCATTTTGTCTCTACTAGTTCAGGAAG CTCCTGTGGGTGAGGTCTGTGAAGCATTTAAAGTTGCAAGAGGAATGGTTCAAGCCTTGCAAGAGAATGCTGGAAGGTTTGCATCTATGGTTGCAGTGTT TTGTGAGAGGCTTGGATGGCATGATCTTGAAGGCATAGTTGCTAAGTTTCAAAATCGTGTATCATTTGGGGTTAGAGCAGAGGTTGTTGAACTTACCACC ATTCCCTTTGTTAAAGGTTCTCGAGCCAGAGCACTCTATAAAGCAGGTTTACGTACACCTCTTGCAATTGCCGAAGCATCCATTCCTGAGATAGTAAAAG CACTTTTCGAATCTTCATCATGGGCCACAGATGAAGGTTCTGCCCGGAGGATCTCACAATTTAGTGTAGCCAAGAAAATAAAGAATGGTGCTCGGAAGAT TGTTCTTGACAAAGCTGAAGAGGCAAGGGTTGCTGCTTTCTCAGCCTTCAAGTCACTTGGATACAGTGTCCCACAGTTTGCTCCACCCATATTATCTGCT GCTGCAAGTGATTCTATCAGGAAAGAAGCTGGAAGTCCCTCTGGAAGTGACACAGCTGATACTAGTCATAGCGCCGTTGCTGCAGACCACATCAATAATT CTAATAAAGTTCCTTTAGTAAAAGAAAGAGATGACTTAGTAAAATCACCTGACAATGCTCCCCTGGCTCCTGTAGATGGAAAATTAGGCAGTGAGATGCC ATATAGCTTTTCTACCGAAAAGTCTGCAGTTCCAGTTGTAGGACCTACGAGGAATGAGTTAAAGGCTACTTTTAACCTTACAAGAAATTCAGATATGACC ACTGTTTCTATCCAGTTACAGAAAACAAATGATAAAACAAGTATACTTGACGGGTGTCATGCTCGTGGTATAGAAGAACATCAGAGTGGAAATTTGGCCA GTGGTAATGGGGTTAGTTCCAGTCAGAGAGGTCCCATTAATGCAGTTAGTAGTCTTGGTGGGCTTGATCAATTTTTGGATCTATGGGATACTATTTCGGA GTTCTACTTTGACATCCACTACATCAAACGCATGGAACTGCACTCTGCTGCCCCATTCGAAATACATGGCATGGCCATCTGTTGGGAAGGCTCTCCTGTG TACTACATTAATCTTCCCAGGGATATTCTATTGTCTGACAATAGAAAAGATGGCTGCTTACCCTTGAGTGGACACAGTCCTAAGCTGAAAGTTTCATCTT CAAATTCTAAGGAGGCTTTGGAGATTGCTATGCATAGATGGAGCAGGATTAGTAAAATATTAGGGAACAAAAATGTCAGAAAGTTTGCCTGGAATTTGAA GATTCAGATTCAGGTGCTGAAAAAACCCGCTGTTTCAGTTCAGAGATTTGGTTGCCTGGACAATCTTGGAGATACAGTGGACCTTGAAATTGTAGACAAT TCATACGTATTATTGCCCCATATCCATGTTAAAGATGCAATTGACATGTGCGTCGTGGCTTGGATTCTGTGGCCTGATGAAGAGAGTAGCTCCAAACCTA ACCTGGATAAGGAGGTAAAGAAGAGGTTATCAGCTGAGGATGCTGCAACAGCTACTCAAAGTGGCAGGTGGAGGAATCAGATGCGAAAAGCTGCTCATAA TGGTTGCTGCCGTCGGGTTGCTCAAACACGTGCATTATGCTCTGTTCTCTGGAAACTACTTGTTTCTGAGAAACTTGTCGAAGTGCTTATGGGAATCGAA ATCCCATTGTTGAATGTTCTTGCTGACATGGAGCTTTGGGGAATTGGTGTTGACTTGGAGAGATGCATCCAGGCTCGTAAATTGTTGGTAAAAAGGCTAA GGTATCTTGAGAATGAAGCTTATAAACTGGCTGGGATAAAATTTTCATTGAGTATGCCAGCAGATATTGCCAAGGTGCTATTTGAACACTTGAAGCTGCC CATACCTGATGGTCGAAATAAGGGAAAACAACATCCAAGTACCGACAAGCACTGTTTGGATGCACTGAGGCATGAACATCCTATTGTTCCAGTCATTAAA GAGCATAGAACACTGGCAAAGCTCTTGAATGCTACGCTAGGATCAATTTGTTCTCTGGCTAGGCTATCTGTAAGCACACAGAAGTACACATTACATGGTC ACTGGCTCCAAACATCGACAGCAACTGGTCGGCTTTCAATGGAGGAACCTAATCTTCAGTGTGTTGAACATGCCGTGGAGTTCAAAATGAACGAGGATAA AAATGGAGGTGACACTGATGACAGTTGTTGTACAATTAATGCTCGTGATTTCTTTGTTCCCACTCAGGACAACTGGTTGCTGTTAACAGCAGATTATTCT CAGATAGAATTGAGGTTGATGGCACACTTCTCTAAAGACCCTTCACTTATTGAACTTCTCAGTAAGCCTGATGGTGATGTCTTTACAATGATCGCATCGA GATGGATTGGGTGTCCCGAGGCTTCTGTCGGTTCTCATGATAGAGATCTGACCAAAAAGATGGTGTATGGCATTCTTTATGGTATGGGTCCCAATAGCCT TGCAGAACAACTTGATTGCACTTCTGATGAAGCTGCAGAAAAGATTCGTAACTTCAAAAGAACTTTTCCCGGTGTCGCTTCCTGGCTTCTGGAAGCTGTT GCGTCGTGTCGTAACAAAGGTTACGTGGAGACCCTTAAGGGAAGAAAACGATTTCTGTCAAAAATAAAACTTGGCAACAGTACAGAAAAATCAAAAGCTC AGAGGCAAGCTGTGAATTCCATTTGTCAGGGATCTGCAGCTGACATAATCAAGATTGCAATGTTACGAATTTACTCCGTAATTGTAACTGGAGTCGATAG CACGGATTCCGATTCCTCAGTAGCAACTAAGTTCAGCATGCTTAAAGATCATTGCCGGATTCTGTTACAGGTACATGATGAACTAGTGCTGGAAGTTCAT CCTTCTATGATAAAGGAAGCTGCCATGTTATTACAGACATGCATGGAGACAGCAATCTCACTCCTTGTTCCTCTCCAAGTGAAACTTAAGGTTGGAAGAA CATGGGGATCTTTGGACTCATATACACCTGAGATAATGTTAAAATATGCTGCTCAAATCAATGAACCTTGAAGCACAAAGACCACTGTTTTTCAAAGTAA ATCACCCTTAATTGTGGAGATTTGGAAGATCTGAGAATGCAGTAGGAAAGAATTTTGGTAATGAAGCTTTCACTGTGTAATCTTGGACTCTCCTCAACTG AGATAAAGGCAAAATTAGTTGGAGTGTTTAGCAAGTAATAATACTGATATTCATTAAAATCATTTTTTATGTATAGGAATTGGAAAATAAGTTTTCTTTT TACATAGAAATGTATATATACTCAATGAGAATAAAGTATTTCCTTATATGAGGAGATAAATTATCTCATTAAATTCATTCACTGATTGACATGTGTCTGA TTTCTCTTCTTTATATGAGTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_161909; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_339243
| Blastp | Helicase and polymerase-containing protein TEBICHI from Arabidopsis with 63.41% of identity |
|---|---|
| Blastx | Helicase and polymerase-containing protein TEBICHI from Arabidopsis with 63.41% of identity |
| Eggnog | DNA polymerase(COG0749) |
| Kegg | Link to kegg annotations (AT4G32700) |
| CantataDB | Link to cantataDB annotations (CNT0000777) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447493.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |