| Id Trinity | TRINITY_DN48539_c7_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_339246 |
| Sequence | TTTGAATTTCTTCTTCTTCTTCTTATATGTCTCAACTTGTCTCTCCCTCCACTGCATGAGGAGTATTCAAACACTTCTCAAACGACGTCGTATTCATCAC TAGACCTAGTTTTCTTCATTTCATTGCATTCTCTTCATTCATGGCTTCTCCTTCTCCTCGCAATCGCATTCATAAGTTTTATGCTTCAAAGAAAAGGAAA GCTGTGTCACCTGTTGCTAAAGTTGGGAAATCTGAAAAAGGTGCAAGACATGGGGGTGATGGTTCTCCAAGTGCCAAAGGTACTTTGGACAGTTACTTGG TTGCATCGCAGGATGATTGTAATGCCGCCAGGCTATCAAACATGCCCTCTGATTCTTTGACTAGGCAGGATTTGGTTAAGAGAAATTTAGCACTAGAGAT TAATAGTGCTTCTGACAATGAACTTGATAAGCCGCCCGTTTATTCGGTTCGAGGGCATCAAGACTTTGAAGCTAATCAGCTGAGACTAATAAATGAATTA CCCAAGGCGAGTGGCATGGAAGTTGAAGACCCTGTACAGGAAAACAACTGCAATGATTTCAAGCAGGGTGCAGTGAAGTCAGAACTCAAACAGTTCGCAG AAGACTTTTTGTCCTTGTATTGCAGTGATTTACGTCCGAGCGTTAATTCACCTTCCGAGATGAAAGTGAATGACCATAAAAGACATGATTTCATGACATT AGAAGTGGAAAGTAATAGTCTAGCACAGAAGTTTAGTGACACTGGTAAATGTGGTGAAAACATCTCCAGTGCAAAGATCCCTGAAGACATCAAGTCTGGT GCAGTTGGTAATACTATGGCTATGGCATATGTTTCTTGCTGTTCAACAAAGGTTTCTGGTGGTGGTGATGCTATTGCTCTTGACACAAGCTTGAGAAAAT GTAGTTATACACCTAAATCACCTAAGAATATGGCTGCATATTGTACGCCGGGATCTTTGATTGTTAAAACACATGTTAAGGAGACTCCAAAGTCAACACG TGGAAGCTCAATGTTTTCACCTGGAGAGGCTTTTTGGAATGAAGCAATTCAACTTGTTGATGGTTTGTCTGTTCCCATGGCTAATGGCTCTAAGGATAAT GTCATGGAGGAGCGGCTTGAGATGGAGAGCTCATGTAATGTACAAAATTGTGATGGGAAGCCAAGGAAAATATTTGATGAAAGTAAAAGCAGACTCTGGA ATACTGAAATGAGTACTTCACAAGGGTTGGTTGGGATGCACACAAAAGATCCATCGAAAGAAGAGTCCAGGCTTCCTGTTAAGCATTTTGATTTTTCGTG TGAGGACAGTAATTTGGATGAAAATACTATGCAAAATTGTTCTGCTGGTAATCTGACCAATATTAATTGTGGGACTGGCAGAGGGTATAAATCTGGTTCC TTGAAAGGTCATATGCATGGGAAGATGAATGAAGAGCAACAAGAGATTTTAGTAGATGCAGTATGCAAAAGAGTGAATTTCTCAAGTCAGGATAATGTAA GTATGGCATTTAATTCACCCCTCTATGATGCTAGGACAGCCATTAGAACACATGCTTCTGATGAAAGTACTCCTTCGAGTGGTGTGTCACTTAATGACCA TTTAGACCTAAACAGTTGGCTTCCACCTGAAATATGCAGCATATATAGAAAGAAAGGAATCTCAAAGCTTTACCGTTGGCAGGTTGATTGCCTTCGGGTG GATGGTGTCCTACAAAGAAGAAATCTTGTATATTGTGCTTCTACAAGTGCGGGTAAGAGTTTTGTTGCTGAGATTTTGATGTTGCGGAGGGTGATAACTA CCGGAAAAATGGCACTACTTGTTCTTCCATATGTTTCAATTTGTGCAGAAAAGGCTGAACACCTTGAACGTCTTCTCGAGCCACTCGGTAAACATGTTCG TAGTTATTATGGCAACCAAGGTGGTGGGACTCTTCCTAAAGACACTTCTGTAGCTGTCTGCACAATAGAGAAGGCAAACTCGTTGATTAATAGATTATTG GAAGAGGGACGTCTATCAGAAATGGGAATTATTGTGATAGATGAACTGCATATGGTCGGAGATCGAAGTAGAGGTTATCTTTTAGAGCTTATGTTGACAA AGCTTCGTTATGCAGCAGGGGAAGGTATTTCAAAATCAAATTCTGAAAGTTCTGGTGGAAGCAGTGATAAAGCTGATCCTGCTCAAGGTCTGCAAATTGT TGGAATGAGTGCAACAATGCCAAATGTTGCAGCAGTTGCTGACTGGCTTCAAGTAAGCAGAATAACAAGCATCACTAACTCTGATACACATCAATAATTG AGCTTTGTCTTTCTCTTAGCCAGCTGTCCTATTTTGTTGTGATTTTTGATAGTATAATTGCTTCAACCTAATATTTTCTATGTTAGCTGCATAATACAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_161909; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_339246
| Blastp | Helicase and polymerase-containing protein TEBICHI from Arabidopsis with 47.8% of identity |
|---|---|
| Blastx | Helicase and polymerase-containing protein TEBICHI from Arabidopsis with 47.64% of identity |
| Eggnog | DNA polymerase(COG0749) |
| Kegg | Link to kegg annotations (AT4G32700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447493.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |