| Id Trinity | TRINITY_DN48541_c6_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_336519 |
| Sequence | CATGTTGTAATTTTGTGATTGTGAATGTGATTTATGAGGGTTAAAGCTACTAAGCGTGTGATAGTGATTGTGATTGAAATCGAGATGAGTAGCGTTCCAA AGGAAACAATTGAAGTAATCGCACAGAGCATTGGCATCACCAATTTATCCCCTGATGTTGCTCTCGCTCTCGCTCCCGATCTCGAGTATCGGATTCGTGA AATCATGCAGGAGTCCATCAAATGCATGCGCCAGTCTTTGAGTGTGGTTGGAAGGGGTTCTTTTGTTGTTAAAGAGAAGTTGAAGATTCTTAAGGGGTTT TTGAAGCGGTGGAATAGGGAGCATTTTGGTGTGCTGGATAGAAAAATTTATGATCAAGTGGCTATTATCAACCTCATTGATGGTAAAGGCAGTTCTGGTG CTCTTTCTAATGAATATATCTCTACTAGGAATATGGCCACTGCTTATCTTTGGAGGTTCGCGAGTCAAAATGGTAATTTATTACTTCAGAAATCGAGACA GAGATGGCTTCAGGATGGGGATTCAGATTCTAAATTCTTCCATGCAACAATTAACAGGAGGAGAAAGTCTAATGCTTTACTTGGTATGTATATTGATGGT GTATGGGTGGATAATCCTTCCTTGGTTAAAGACTATATCCGCTCTTTTTTTCAGGATCTTTTCTCTGAGTCTAACTGGAATAGACCGACTCTTGATGGTA TTGATTTCAAGAGTATCTCTAATGCTGATAATAGTTTCCTCACGTTGAAGTTTGAGGAGGAGGATATCAGAGAAGCTGTTTGGAGTTGCGATGGCGATAA AAGTCCATGGCATGATGGGTATAATTTCTGTTTTATTAAAAAGTTATGGAATTGCGTGAAATCAAATATTCTTGCTTTGGTGGATGATTTCTACACTTAT GGTAATCTTGTTAGAGGTTGCAATGCATCTTTTATTGTGCTGATTCCGAAGAACGACTGTCCACAAGGCCTTGATGAGTATAGGCCGATATCTCTTATTG GTTGTCTTCGGAAAATTATTTCTAAACTTCTTGCTGGCAGAATAAAGAAGGTTATCCACACGGTCATTTCTGATTGTCAGATTGCCTTCATTAAGGGTCG TTACATTATGGATGGAATTGTAATTGCTAACGAGATCATTGATCAGGCAAGGAAAAAGAAGGATCAGAACTGTTTTATTTTTAAGGTGGATTTTGAAAAG GCGTACGATTCGATGGACTGGAGTTTTCTGCTCTACATGATGGAAAGAATGGGTTTCAGGGCCACTTGGAGAAATTATTTCATACCTTGATGAGTATAGG CCGATATCTCTTATTGGTTGTCTTCGGAAAATTATTTCTAAACTTCTTGCTGGCAGAATAAAGAAGGTTATCCATACGGCCATTTCTGATTGTCAGACTG CCTTCATTAAGGGTCGTTACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_161925; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_336519
| Blastp | Transposon TX1 uncharacterized 149 kDa protein from Xenopus with 24.34% of identity |
|---|---|
| Blastx | Transposon TX1 uncharacterized 149 kDa protein from Xenopus with 24.34% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429814.1) |
| Pfam | TATA box binding protein associated factor (TAF) (PF02969.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |