Ll_transcript_336524

• Id Trinity: TRINITY_DN48541_c6_g2_i7
• Name Transcript: Ll_transcript_336524
• Sequence: GAAAATTATTTCTAAACTTCTTGCTGGCAGAATAAAGAAGGTTATCCATACGGCCATTTCTGATTGTCAGACTGCCTTCATTAAGGGTCGTTACATTATG GATGGAATTGTAATTGCTAACGAGATCATTGATCAGGCAAGGAAAAAGAAGGATGGGAACTGTTTTATTTTTAAGGTGGATTTTGAAAAGGCGTACGATT CGATGGACTGGAGTTTTCTGCTCTACATGATGGAAAGAATGGGTTTCAGGGCCACTTGGAGAAATTATTTCATACCTTGATGAGTATAGGCCGATATCTC TTATTGGTTGTCTTCGGAAAATTATTTCTAAACTTCTTGCTGGCAGAATAAAGAAGGTTATCCATACGGCCATTTCTGATTGTCAGACTGCCTTCATTAA GGGTCGTTACA
• Tissue: pods
• Gene name: LI_gene_161925;
• Additional information: -

Expression of Ll_transcript_336524

FPKM

• PAB: 1.4
• PNAB: 0
• PS1: 0.5
• PS2: 0.2
• PS3: 0.1
• PW1: 0.2
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_336524

• Blastp: -
• Blastx: LINE-1 retrotransposable element ORF2 protein from Mus with 34.09% of identity
• Eggnog: NA(ENOG41120A8)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429814.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;