Id Trinity | TRINITY_DN48542_c1_g5_i1 |
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Name Transcript | Ll_transcript_337323 |
Sequence | TATATAGCTGATCTCTTTCTGCTACCCTATGATCCACCACAATAAAGGATGCAATTCTAATGTAATCTATTTAAGTTACTAGTTTAGTTTAAAATTCTAG CAATCAAAGAGTTGAAGCTAATTGTATGCATAAAAGTATAAAGCAAAAATTATTGGCACTATATATTAATTATAAGAAAATTTTACCATAATAAATATCT TCTCAAGATGCCGATTGCTTGAAAATTTTCGCACTTTGATTTGGTCCCTTAATTTGGTTTCTCTTCTTTTTCTTCTTCTTATATGGAATCCCTCTTGCCT TCCCCTGGCACTCCTTTACCTCACGGAGGTAAATCCGAATGGCTCCGCTTCCAAAGGGATTAGTCTCTGGCAATCCACCGTGCTCCTCATAGGCGGCTCG GAGCCGTCCGATGAGGGCATCGAGACTGCCCCAAGCCTGCCTAAGAGGACACGCGCAAGGCGCCGGAGGCGCGGGTTGACCAAAGAAGATGCAACTTTGG AGATGGACCTTGGTCTTCCCAAATTGGTCAAGGTACCTAAGGAACTCTATGACATGGTTGAAGTTGCACTGAGAGAGTGGAACTGGAGGGCTCTGATTGT TCAGGTACTGGCCAAAGGTGTTCCAATCTCTCTTCTTTTGAGACTCATACCGGCTCAATGGTTGTGGTTGCTGATGATGTTGTTGTTGTTGATCGGAGGG AGCTTGTGATGAAGATGAGGATCCATGAGTGGAACTATTTTGCATATGGTTAGACATGGTAACTGTGTGAAATGTAGAGGAATAGGTAGTAGGGGTATGG AGTTATTGAGAAGAAAGAAATATCAAGACGATTGTGAGTGGGAATGAGGTTAAAGAATATGTGTTAGTGCACTGGAGAAAGTTCTAATGATGTTTCATTC TCTATTTCGAACCATTATATATTGCTAAATAAATAGAAGAATTTTTTTAAAACAAAATATAATAAAAAGTAATTTTTTGTTTGGTCTGAAACAAAGAATA AAACATCGTTTGGAACATGTAATCTGCAAAATCACATCCACAGCAGAATGGTGTCTTTTTAGAGGACATGTCATGGGCCC BLAST |
Tissue | pods |
Gene name | LI_gene_161938; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337323
Blastp | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 from Arabidopsis with 72.79% of identity |
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Blastx | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 from Arabidopsis with 82.26% of identity |
Eggnog | light sensitive hypocotyls 10(ENOG41119V3) |
Kegg | Link to kegg annotations (AT2G42610) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444945.1) |
Pfam | Protein of unknown function (DUF640) (PF04852.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |