| Id Trinity | TRINITY_DN48542_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_337336 |
| Sequence | AAATAATGCTCCTCAGAACTCAGAAAATGTATTAACTCTTCCATAGGCTAATAATCAACGTTACACTTACACCCCACTTGATATTCTCTCATTTGCACGT CACAAAATCAATATCTCCACACAAATATTAGCCACTAACTAGTAACCACGTATGTGAAAACTTGTGTGCTTCACATGAGTTTATATTGTTACACCTTGGG TACTAACATGAACATAATGAAACATGGGTGTATAAGTGACAGCTTCAAACTCAACCATGTAGAAACAGCAGGTTCATGCTTTTTGCCACTAAATAAATCC CACCAAAACCTGACAAGCCATATTAGTTTTGTGTCAAATTTCAACAACAAATATTCTTCTCCTATGATGGAGGAGGACAAGAAAATGTTATCAGAATCAG AGGACTATTCCAAAGAGTTGGATGTTGCTGTCAGAGCAATGCAGATGGCATGCTTTCTCTATCAGAAAGTGCAAGACACTTTGGTTTCCAAGTCTAGGTG CAATGATCAAGTTGAATTCAAGGATGAGAATTCTCTACTTACAATTGCAGGTGAATGTTCCTAAGCACTAAAATTTGTTGAACCTTTTGTTTATGATATA TTTATTATTATTTTAAATCAATTGAAAAGGCTATGTTACATATCCAACATTATATATTGTATCTTTATATGGGTTTATATGGATTTCTGAGTTGGAATTA GATATTATAACAACTTTGGTGTAGCGGTGTCTGTAGCATGAAATTGTAGGGTCCTTAGAGAACACATCATACTTGTGCCTAATTTGCAAAATATTCAATC AAATTATGACAATTGGAATCTTCTTTGGTGATTATAAGTGACAAGGGAGGAATGCTTAATCTTATCTGAAACACTAGGACATACTGATAAAAAAAATCTA CAGTGCTTTTGAGTTTAGAGTCAATGAAAAATTACTTGCAAGAAAAGTAACTGTTAATTTTGGGGACTTCACTGGTTATAAAAAATATGTGTTTCTAAAA ATGGAAATAATAGGTTGGTAAAAGTAATATTGCTTTCAAATTCTTTTTTTCTCATGACTTTATCTACAATAGTAACTTTACTTGTATTACTGCTACCAAA CTCCACTAGAGAAAACCTTAGATATTCTTTATTTGGTGAACTGTTTCTCACAAGAAAACAAGTGCATGAAATAAGTTTAAGAAGTATTATGAGGAATAAA AAGGACATGGTTTTAAAACGCCTTTGCCATCTTGTAGTTACTGAGAACATGAAATTGCATCAAGATGGCAATCTCAGTTTCCTTGTCTTGTTCCACAAAC AAACTAATTTTGACCGAATAGAATTGTTCACCCTTAGTTCTATCACTTGGAAATATTATGTTACTTAAGTTTCATAGACATGTGACTTTTATTTTGTTAT TCACTTCCCCTCTGGCCCTCTAAGTGAAGAAGAAGGAGAAATATAAAACTTAAGCCTTTTCTAATTTTGTTTAAAAGGAAGGAACTGCAAAGGAGGAGGA TAAGTATTTTGTGTAAAATATTAGTTTTGTGTCTAATTTTGTTTAGGTGCTGCTATGAGCATTGAATTGAAATTGGTTGCAGTCCAAATTGGAAATACAC TAATTATTCATGATCTTCATAACAGATGCAAATATCAAACCATATCTTCTTTGTAAACTACTTATGTATGCATAAACATAGATTTACTCTGACATAAGTA AAGATCTATGATCAAATTTATGCTGTCACGGTCACTATATTTCCTTACAACTTTGGTCATATGATGCTTAAGGCATATTAGTCTTGAATTTATGACGAAA CCATTTTCGGGCACGATTTATCAATCTTTTCCTGGATGTTAGTGAATTTATATTCATGCTTACAATAATCACTTGTGCCTTTCATTATGCTATTTAAATA GGGTGGAGTGTCCAAGCAATTGTCAGCTGGATACTGTCACAATGTTTAGGGAGTGAAAATATCTCAATTCTAGCTAAAGGAGATGTTCAAACACTCTGCA AGAGTAATGCATCTGAACTGTTAGAAGCTGTGGTTAAAACTGTGAATGAATGTATATCTGAAGCACCTAGATTTGGAGTTCAAGAGCATAAATCAGCTCT TGGAACTTCAGAGGTTCTTGAACTCCTTAGTCACTGCAACTCAGTTTGGGCTCCTTCTGCAAGATTTTGGGTACTTGGTCCTATTGATGATACTTTGGGA TTTGTGAATGGAGATCAATATGCTGTATCTCTATCACTCATAGAGGCTGGAGAAGTTGTTCTTGGAGTTCTTGGTTGTCCTAACTACCCAATGAAAAAGG AATGGTTAAGTTATAATCACAGTTATCAAAGGATTATATCAATGTTGACTCCAACAACCTCTGAGACTTGGAACAAAGGTTGTGTAATTTATGCTAAAAA GAGCAGTGGCAAGGCTTGGATGCAACCAGTGCTCCATGTTAATAAAAAGTTTGTGTGGCCTAACCATGCAAAACAAGTTTCTATCTCTTCCATTGATAAT CCAGCATTGGCTAATTTCTGTGAAACAGTTGACAAAGCCAATTCAAGCCACTCTTTTACTGAAGGACTGGCTCTCAGTGTTGGTCTCAGGTGCAATTTCA TTTCATTCCATTCAATATTAGTCACCCTCTCTCTTTCTATTGGCTTTTCACCTTTGTTATTGTTAGTGTCAAGACATTCTAACATTGGATTTATCCCTAT GCTTTTATTTTTCCCTTTAACATCTATATGCCATTAGTATCTTACACTTAGATGTATACATATACATATATATCCATATATACATATGCATATTGAGTGA GAAAGGTCCAATCATTGTTGTGTAGCTTCACATTCCTTACTTCACCATTAGTTGCATTCTTATAAATCCCAATGAAAAAGATGAAATATTTAAAATATCA CCTTTGAAAAAGGTACTACGGACAGTATAAACCTACTAGTATATTTCTTGCTTTGTATGATAGCTCTTATTCACCATTTGTTTGCAGTAAACAGCCATTA AGAGCACGCGGCGCGATGAAATATGTAGCAATAGCTCATGGGAATGCTGAGGTTTTCATGAAGTTTGCAAGAGCTAGTTACAAGGAGAAAATATGGGATC ATGCTGCTGGTGTTATCATCATAGAAGAAGCTGGTGGCATTGTAACTGATGTTAGGGGTGATCCCCTAGACTTCTCAAAAGGTTTATATTTGGAAGGCCT TGATCGTGGTATAGTTGCTTGTGCTGGAGCCACATTACATGAAAAGATCATTGATGCTATTGATGCTAGTTGGAGCTCTTCTTGCCTTTAATACTATTAT TCTATTTATCTGCATGTTCATAGATATATTTATGTTTATGTGTGACTTATTTTTACTTTGTCCAATATCTTTGAAATCCCTCTTCTGTTATTGGTGATGT TTAGCTACCAGTTTGTTTGCCTGAAATTACTATAATTTGGCATTGTATGGATACAAAGCTTTGAATGTCACATAGTATTCTGAATCAATGGCCCTTCAAG ATTGACATAACTAGTTTTTGAGAAAGATAGAATGAACCAAAATTATGTAGATGATCAACTGAAATAAATTATATAGCATGTCTCTACCAGCCACTCTTAT GTCCAAAGCACTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_161941; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337336
| Blastp | - |
|---|---|
| Blastx | PAP-specific phosphatase HAL2-like from Arabidopsis with 46.33% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445630.1) |
| Pfam | - |
| Rfam | - |
| GO | - |