Id Trinity | TRINITY_DN48542_c2_g3_i3 |
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Name Transcript | Ll_transcript_337338 |
Sequence | ATCCATTCTAACTATTCAATGGAAATGGAAGCACCAAGCCCCCCACTTCCACAACACCACTCACACGCCAAGCCCCTTTCTCGCCTCAACTCTTACGTAG CCAAAACCAGAGCAGGCAAATATTTCAAGCTCAACCAACGAAACTCCACCTTCACCACCGAGCTCCGCGCCGGCACCGCCACCTTCCTCACCATGGCCTA TATCCTCGCCGTCAACGCCAAATTGTAGGGTCCTTAGAGAACACATCATACTTGTGCCTAATTTGCAAAATATTCAATCAAATTATGACAATTGGAATCT TCTTTGGTGATTATAAGTGACAAGGGAGGAATGCTTAATCTTATCTGAAACACTAGGACATACTGATAAAAAAAATCTACAGTGCTTTTGAGTTTAGAGT CAATGAAAAATTACTTGCAAGAAAAGTAACTGTTAATTTTGGGGACTTCACTGGTTATAAAAAATATGTGTTTCTAAAAATGGAAATAATAGGTTGGTAA AAGTAATATTGCTTTCAAATTCTTTTTTTCTCATGACTTTATCTACAATAGTAACTTTACTTGTATTACTGCTACCAAACTCCACTAGAGAAAACCTTAG ATATTCTTTATTTGGTGAACTGTTTCTCACAAGAAAACAAGTGCATGAAATAAGTTTAAGAAGTATTATGAGGAATAAAAAGGACATGGTTTTAAAACGC CTTTGCCATCTTGTAGTTACTGAGAACATGAAATTGCATCAAGATGGCAATCTCAGTTTCCTTGTCTTGTTCCACAAACAAACTAATTTTGACCGAATAG AATTGTTCACCCTTAGTTCTATCACTTGGAAATATTATGTTACTTAAGTTTCATAGACATGTGACTTTTATTTTGTTATTCACTTCCCCTCTGGCCCTCT AAGTGAAGAAGAAGGAGAAATATAAAACTTAAGCCTTTTCTAATTTTGTTTAAAAGGAAGGAACTGCAAAGGAGGAGGATAAGTATTTTGTGTAAAATAT TAGTTTTGTGTCTAATTTTGTTTAGGTGCTGCTATGAGCATTGAATTGAAATTGGTTGCAGTCCAAATTGGAAATACACTAATTATTCATGATCTTCATA ACAGATGCAAATATCAAACCATATCTTCTTTGTAAACTACTTATGTATGCATAAACATAGATTTACTCTGACATAAGTAAAGATCTATGATCAAATTTAT GCTGTCACGGTCACTATATTTCCTTACAACTTTGGTCATATGATGCTTAAGGCATATTAGTCTTGAATTTATGACGAAACCATTTTCGGGCACGATTTAT CAATCTTTTCCTGGATGTTAGTGAATTTATATTCATGCTTACAATAATCACTTGTGCCTTTCATTATGCTATTTAAATAGGGTGGAGTGTCCAAGCAATT GTCAGCTGGATACTGTCACAATGTTTAGGGAGTGAAAATATCTCAATTCTAGCTAAAGGAGATGTTCAAACACTCTGCAAGAGTAATGCATCTGAACTGT TAGAAGCTGTGGTTAAAACTGTGAATGAATGTATATCTGAAGCACCTAGATTTGGAGTTCAAGAGCATAAATCAGCTCTTGGAACTTCAGAGGTTCTTGA ACTCCTTAGTCACTGCAACTCAGTTTGGGCTCCTTCTGCAAGATTTTGGGTACTTGGTCCTATTGATGATACTTTGGGATTTGTGAATGGAGATCAATAT GCTGTATCTCTATCACTCATAGAGGCTGGAGAAGTTGTTCTTGGAGTTCTTGGTTGTCCTAACTACCCAATGAAAAAGGAATGGTTAAGTTATAATCACA GTTATCAAAGGATTATATCAATGTTGACTCCAACAACCTCTGAGACTTGGAACAAAGGTTGTGTAATTTATGCTAAAAAGAGCAGTGGCAAGGCTTGGAT GCAACCAGTGCTCCATGTTAATAAAAAGTTTGTGTGGCCTAACCATGCAAAACAAGTTTCTATCTCTTCCATTGATAATCCAGCATTGGCTAATTTCTGT GAAACAGTTGACAAAGCCAATTCAAGCCACTCTTTTACTGAAGGACTGGCTCTCAGTGTTGGTCTCAGTAAACAGCCATTAAGAGCACGCGGCGCGATGA AATATGTAGCAATAGCTCATGGGAATGCTGAGGTTTTCATGAAGTTTGCAAGAGCTAGTTACAAGGAGAAAATATGGGATCATGCTGCTGGTGTTATCAT CATAGAAGAAGCTGGTGGCATTGTAACTGATGTTAGGGGTGATCCCCTAGACTTCTCAAAAGGTTTATATTTGGAAGGCCTTGATCGTGGTATAGTTGCT TGTGCTGGAGCCACATTACATGAAAAGATCATTGATGCTATTGATGCTAGTTGGAGCTCTTCTTGCCTTTAATACTATTATTCTATTTATCTGCATGTTC ATAGATATATTTATGTTTATGTGTGACTTATTTTTACTTTGTCCAATATCTTTGAAATCCCTCTTCTGTTATTGGTGATGTTTAGCTACCAGTTTGTTTG CCTGAAATTACTATAATTTGGCATTGTATGGATACAAAGCTTTGAATGTCACATAGTATTCTGAATCAATGGCCCTTCAAGATTGACATAACTAGTTTTT GAGAAAGATAGAATGAACCAAAATTATGTAGATGATCAACTGAAATAAATTATATAGCATGTCTCTACCAGCCACTCTTATGTCCAAAGCACTA BLAST |
Tissue | pods |
Gene name | LI_gene_161941; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337338
Blastp | PAP-specific phosphatase HAL2-like from Arabidopsis with 58.5% of identity |
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Blastx | PAP-specific phosphatase HAL2-like from Arabidopsis with 56.83% of identity |
Eggnog | 3'(2'),5'bisphosphate nucleotidase(COG1218) |
Kegg | Link to kegg annotations (AT5G54390) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445630.1) |
Pfam | Inositol monophosphatase family (PF00459.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |