Ll_transcript_337342

• Id Trinity: TRINITY_DN48542_c2_g3_i5
• Name Transcript: Ll_transcript_337342
• Sequence: AAATAATGCTCCTCAGAACTCAGAAAATGTATTAACTCTTCCATAGGCTAATAATCAACGTTACACTTACACCCCACTTGATATTCTCTCATTTGCACGT CACAAAATCAATATCTCCACACAAATATTAGCCACTAACTAGTAACCACGTATGTGAAAACTTGTGTGCTTCACATGAGTTTATATTGTTACACCTTGGG TACTAACATGAACATAATGAAACATGGGTGTATAAGTGACAGCTTCAAACTCAACCATGTAGAAACAGCAGGTTCATGCTTTTTGCCACTAAATAAATCC CACCAAAACCTGACAAGCCATATTAGTTTTGTGTCAAATTTCAACAACAAATATTCTTCTCCTATGATGGAGGAGGACAAGAAAATGTTATCAGAATCAG AGGACTATTCCAAAGAGTTGGATGTTGCTGTCAGAGCAATGCAGATGGCATGCTTTCTCTATCAGAAAGTGCAAGACACTTTGGTTTCCAAGTCTAGGTG CAATGATCAAGTTGAATTCAAGGATGAGAATTCTCTACTTACAATTGCAGGGTGGAGTGTCCAAGCAATTGTCAGCTGGATACTGTCACAATGTTTAGGG AGTGAAAATATCTCAATTCTAGCTAAAGGAGATGTTCAAACACTCTGCAAGAGTAATGCATCTGAACTGTTAGAAGCTGTGGTTAAAACTGTGAATGAAT GTATATCTGAAGCACCTAGATTTGGAGTTCAAGAGCATAAATCAGCTCTTGGAACTTCAGAGGTTCTTGAACTCCTTAGTCACTGCAACTCAGTTTGGGC TCCTTCTGCAAGATTTTGGGTACTTGGTCCTATTGATGATACTTTGGGATTTGTGAATGGAGATCAATATGCTGTATCTCTATCACTCATAGAGGCTGGA GAAGTTGTTCTTGGAGTTCTTGGTTGTCCTAACTACCCAATGAAAAAGGAATGGTTAAGTTATAATCACAGTTATCAAAGGATTATATCAATGTTGACTC CAACAACCTCTGAGACTTGGAACAAAGGTTGTGTAATTTATGCTAAAAAGAGCAGTGGCAAGGCTTGGATGCAACCAGTGCTCCATGTTAATAAAAAGTT TGTGTGGCCTAACCATGCAAAACAAGTTTCTATCTCTTCCATTGATAATCCAGCATTGGCTAATTTCTGTGAAACAGTTGACAAAGCCAATTCAAGCCAC TCTTTTACTGAAGGACTGGCTCTCAGTGTTGGTCTCAGGTGCAATTTCATTTCATTCCATTCAATATTAGTCACCCTCTCTCTTTCTATTGGCTTTTCAC CTTTGTTATTGTTAGTGTCAAGACATTCTAACATTGGATTTATCCCTATGCTTTTATTTTTCCCTTTAACATCTATATGCCATTAGTATCTTACACTTAG ATGTATACATATACATATATATCCATATATACATATGCATATTGAGTGAGAAAGGTCCAATCATTGTTGTGTAGCTTCACATTCCTTACTTCACCATTAG TTGCATTCTTATAAATCCCAATGAAAAAGATGAAATATTTAAAATATCACCTTTGAAAAAGGTACTACGGACAGTATAAACCTACTAGTATATTTCTTGC TTTGTATGATAGCTCTTATTCACCATTTGTTTGCAGTAAACAGCCATTAAGAGCACGCGGCGCGATGAAATATGTAGCAATAGCTCATGGGAATGCTGAG GTTTTCATGAAGTTTGCAAGAGCTAGTTACAAGGAGAAAATATGGGATCATGCTGCTGGTGTTATCATCATAGAAGAAGCTGGTGGCATTGTAACTGATG TTAGGGGTGATCCCCTAGACTTCTCAAAAGGTTTATATTTGGAAGGCCTTGATCGTGGTATAGTTGCTTGTGCTGGAGCCACATTACATGAAAAGATCAT TGATGCTATTGATGCTAGTTGGAGCTCTTCTTGCCTTTAATACTATTATTCTATTTATCTGCATGTTCATAGATATATTTATGTTTATGTGTGACTTATT TTTACTTTGTCCAATATCTTTGAAATCCCTCTTCTGTTATTGGTGATGTTTAGCTACCAGTTTGTTTGCCTGAAATTACTATAATTTGGCATTGTATGGA TACAAAGCTTTGAATGTCACATAGTATTCTGAATCAATGGCCCTTCAAGATTGACATAACTAGTTTTTGAGAAAGATAGAATGAACCAAAATTATGTAGA TGATCAACTGAAATAAATTATATAGCATGTCTCTACCAGCCACTCTTATGTCCAAAGCACTA
• Tissue: pods
• Gene name: LI_gene_161941;
• Additional information: details;

Expression of Ll_transcript_337342

FPKM

• PAB: 21
• PNAB: 0.8
• PS1: 4.7
• PS2: 1
• PS3: 4.8
• PW1: 2
• PW2: 5
• PW3: 6.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337342

• Blastp: PAP-specific phosphatase HAL2-like from Arabidopsis with 44.92% of identity
• Blastx: PAP-specific phosphatase HAL2-like from Arabidopsis with 44.92% of identity
• Eggnog: 3'(2'),5'bisphosphate nucleotidase(COG1218)
• Kegg: Link to kegg annotations (AT5G54390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445630.1)
• Pfam: Inositol monophosphatase family (PF00459.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;