Ll_transcript_338358

• Id Trinity: TRINITY_DN48549_c3_g2_i1
• Name Transcript: Ll_transcript_338358
• Sequence: TGGTGGTTAGGATGAGGGGTAAGTGTAAAAGACTTACTCTTGGAGTAACTTGATCCCTCCCCTTTTCAAAAATATATGCCGACATTCAATGTGTTTCATA GGCTGTTATGTGTGTCATCAGTCATTCTTATATGATACATTGAGCTATGTATAAATCTTTACATTTATGGTCTATATATTATATTCTTTTCAAAGTAATA ACTTTATTAATTTCCAATACAAAATTACTATATAAATGCATTTAGTTAATTGTCACAGTTAGAAGAGACATCCTTTGTTTTGCATATTCACTATACTGAA TGGCCTGATGAGGGAGTTCCCAAAGATACATTTGCTGTGCGTGACATTCTTAAAAGATTGTACCATTTACCACCAAACCTTGGTCCAATTGTTGTGCACT GCAGTGCAGGTATTGGTAGAACTGGAACATACTGCACAATTCACAATACAATTCAGAGAATACTTGCTGGTGATATGTCTGCTTTAGATATTGCTAATAC AGTATCTGTGTTCAGGTCCCAGCGTATTGGAATGCTTCAGACTCAGGATCAGTACATTTTCTGCTATAAAGCTATCATAGATGAG
• Tissue: pods
• Gene name: LI_gene_162020;
• Additional information: -

Expression of Ll_transcript_338358

FPKM

• PAB: 0
• PNAB: 3.3
• PS1: 1.6
• PS2: 1.8
• PS3: 1.7
• PW1: 1.8
• PW2: 4.3
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338358

• Blastp: -
• Blastx: Protein-tyrosine-phosphatase PTP1 from Arabidopsis with 80.58% of identity
• Eggnog: protein tyrosine phosphatase(COG5599)
• Kegg: Link to kegg annotations (AT1G71860)
• CantataDB: Link to cantataDB annotations (CNT0002464)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442018.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;