Ll_transcript_338369

• Id Trinity: TRINITY_DN48549_c3_g2_i10
• Name Transcript: Ll_transcript_338369
• Sequence: CTTTGAGATAACAAAAATTATCTCTAAACAATTTAGATAATAAAATGTAAGAAACACTTGAATTTAATGGTTGTATTATATGTAGTTTATGTATTTATTT TAATGATGAGAGGTGTACTATATAGTATATATATAGTGAGAGTTCCATTCTACAATTGTATTATCAGCAACCATGGGTGAGTCTTGTCCTAGAATGCCCC TCACTCTCACTCCTGTTCAAGTCAAGCACTGCACAGAAGCAGTGACTTACTTGAAGGACAAGCTTATGAACAACCTTCACTTGATCCTTCAAGACTTTGC TCACTTAGAAGCCAATATGATAACACCATCTGAGATGAGGAGAAGATCCACTGTAGCACTTCTTCCTCTCAACTTCAACAAAAATCGATATCCTTCTATC TTATCATGTATACATATACATACTCTATTCTCACTTTCTCTATTATACTATAATACCAACTAATGTTACTTACGTACAGTATTCTAAATTACGGTTGCGT TTATCTTGATTGTGGTTGTGGTTGTGATACTTTTCGGGAGACTTTTAAATTACCATAAATGCAATTTAAAACATTATGTGAGTCGAATTACATGTGGGTT GAAAAGCAATGTTTAATTATTTGTTTTATTTTCACTTGGTTTAGTTGATGAGAACAGGGTTATTCTCAGATCTAGTACAGATGGTAGATCTGAAGCACAT GACTATATCAATGCAAATTATTGCTCCATTGAGGCCTCATCTGGTGGAAGTGTATCCCATTTTATAGCAACACAAGGACCACTGCCACAAACCTATGAGG ATTTCTGGGATATGCTTATCCAACAACATTGTCCTGTCATTGTCATGCTTACTAGGTTGCTTGAAAATGACACTGTGGTGAAGTGTGGTGACTATTTTCA AACTCAGGATGAGCCTAGAATATTTGGTAGTATCTCCATTCTCACCAAATCAGTCAAATCTACTGAAAATGCACTCTTGCTGCGCCATTTGGAGGTTAAA CATAAGGATTTAGAAGAGACATCCTTTGTTTTGCATATTCACTATACTGAATGGCCTGATGAGGGAGTTCCCAAAGATACATTTGCTGTGCGTGACATTC TTAAAAGATTGTACCATTTACCACCAAACCTTGGTCCAATTGTTGTGCACTGCAGTGCAGGTATTGGTAGAACTGGAACATACTGCACAATTCACAATAC AATTCAGAGAATACTTGCTGGTGATATGTCTGCTTTAGATATTGCTAATACAGTATCTGTGTTCAGGTCCCAGCGTATTGGAATGCTTCAGACTCAGGAT CAGTACATTTTCTGCTATAAAGCTATCATAGATGAGTTGGAAGACCTTGTATCTCAATATTAACAAGAGTAGAAGGATTCAATGCTGTACCAAAGGATCA GAGTCTGAAGCATTAGCATTCTGGAAACTTTATGAAATTTAATAAAGTTGTTATTCTCAATCTTTCATGTATAATTGCATGCAAGGTCCTCTTCCATTGT ATTAATGGAACTCTATGGAGAACACAAGAGTATAAGACAAAAATAAACTAAATTATAATGTCCTTTTATTTTTTTTTTCTCTTTCTTCTTACCCTGTCCA TCTATTTTTTTTTAGGTAGATGTTCGGTATCTAAAAAATCATGTCTTCATGTATCAAACCAATCAAATCCCACCAAAATTAATTCCTTTACAAGTTTGCA TGCTAGTTTAAAACTTCTATAATAG
• Tissue: pods
• Gene name: LI_gene_162020;
• Additional information: details;

Expression of Ll_transcript_338369

FPKM

• PAB: 2.5
• PNAB: 7
• PS1: 6.4
• PS2: 4.3
• PS3: 11.8
• PW1: 16.2
• PW2: 25
• PW3: 14.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_338369

• Blastp: Protein-tyrosine-phosphatase PTP1 from Arabidopsis with 70.88% of identity
• Blastx: Protein-tyrosine-phosphatase PTP1 from Arabidopsis with 66.24% of identity
• Eggnog: protein tyrosine phosphatase(COG5599)
• Kegg: Link to kegg annotations (AT1G71860)
• CantataDB: Link to cantataDB annotations (CNT0002464)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442018.1)
• Pfam: Protein-tyrosine phosphatase (PF00102.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;