Id Trinity | TRINITY_DN48549_c3_g2_i6 |
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Name Transcript | Ll_transcript_338364 |
Sequence | TGGTGGTTAGGATGAGGGGTAAGTGTAAAAGACTTACTCTTGGAGTAACTTGATCCCTCCCCTTTTCAAAAATATATGCCGACATTCAATGTGTTTCATA GGCTGTTATGTGTGTCATCAGTCATTCTTATATGATACATTGAGCTATGTATAAATCTTTACATTTATGGTCTATATATTATATTCTTTTCAAAGTAATA ACTTTATTAATTTCCAATACAAAATTACTATATAAATGCATTTAGTTAATTGTCACAGTTAGAAGAGACATCCTTTGTTTTGCATATTCACTATACTGAA TGGCCTGATGAGGGAGTTCCCAAAGATACATTTGCTGTGCGTGACATTCTTAAAAGATTGTACCATTTACCACCAAACCTTGGTCCAATTGTTGTGCACT GCAGGTTCATCTCATTTCTCACTTATTCCATTATTGTCACATATTTTATGACCATGTTGAAAATGAATCACATGCATATTTGTCTGAGATAAACTATGTC ACTCAGTGCAGGTATTGGTAGAACTGGAACATACTGCACAATTCACAATACAATTCAGAGAATACTTGCTGGTGATATGTCTGCTTTAGATATTGCTAAT ACAGTATCTGTGTTCAGGTCCCAGCGTATTGGAATGCTTCAGACTCAGGTAACTGGTGTTGCTAATATAACATTTTGATTGTGATTTATGACTGTACTGT TTTTGCATGAAATGCCATGAATTTAGTTGTATAACAAATTAATTACCATTTCTTAACTAAATAACAAACCAAGAGGCTTTGAAATTTAAGAACAGTGCTG ATAGGTTACCCTATATTGTTTATAGGAATAAAGGTAGGTTGTTGCAACTTGCTAGGAACTGGGCTAGATAGTTAGGCAAGGGTGTCTCCAAAAAATTTCT CATAGTTTGCCGACTGCATTACTTGATGTGGCCGCAATATTGAACCCTCGGTTTAACAGGAACATGTAATCATTTCCAAGTTCTTGTTCCCTCCCTCAAC CCTTTTAATTTGTACCATTCACTATAAATAATAATTTGTAAGTTATTATTGTTATCATTACTACTACTTTTGTAATGTGGCCTTCTCTTTGAACTCTTTG GTGATCAGGATCAGTACATTTTCTGCTATAAAGCTATCATAGATGAG BLAST |
Tissue | pods |
Gene name | LI_gene_162020; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338364
Blastp | - |
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Blastx | Protein-tyrosine-phosphatase PTP1 from Arabidopsis with 59.35% of identity |
Eggnog | protein tyrosine phosphatase(COG5599) |
Kegg | Link to kegg annotations (AT1G71860) |
CantataDB | Link to cantataDB annotations (CNT0002464) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442018.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |