| Id Trinity | TRINITY_DN48565_c0_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_338334 |
| Sequence | TGTTATGAAATATGTCTTTAACATGAATAATTGATCATTTGAATATTCTAAGTTTATGCATAATAGAAAATATGAAAATGATAACATTTATTATGATGTC CATAACCTCACATGACAATGTTTGGCAGTAGCCGCCCCTTTTGAAGGAGTCTCAAAGTGGAAGTAGTATAAATATTGGAGGCTCTGTATGGCTAATGAAT AGGAAAATGAAGATGAGGGTTATAGTGTTATTAAGTGTGTTAATGTCAGTAAGTGTAGGGAGGTGCTGGGGAGAACAATGTGGGAGACAAGCAGGGGGAA GTGTGTGCCCAGGTGGATTATGTTGCAGCCAGTTCGGATGGTGTGGGTCAACCACTGAATACTGTGGCACTGGTTGCCAAAGCCAATGTGGTGGAAGTGG TGGTGGTGGTGGTGGTGGTGGTGGTGGTGATATTGGCAGTATCATCTCCAGGGACAACTTCAACCAGATACTTAAACACAGTAATGATGCTGCCTGCCCA GCCAAAGGGTTCTACACCTATGATGCCTTCATTTCTGCTGCCAAGTCTTTCCCCAACTTTGCTTCAACTGGGGATACTACCACCCGCAAAAGGGAGATTG CAGCTTTCTTAGCCCAGACTTCCCACGAAACTACTGGTTTCTTTCTTTAACTACTATATTTGTTTTACAATTCTACCAATTCTAATTCTATCATTAATAC AAACAAGTTATTAATGATTAATAGGGGGGTGGCCAAGTGCACCAGATGGCCCATATTCTTGGGGGTACTGCTTTGTTAGGGAAAGAAACCCAAGTGGTTA TTGTGAGCAAAGCACTCAATTTCCTTGTGCTCCTGGCAAGCAATACTATGGTCGTGGTCCTATTCAAATCTCCTGGTATGTAAATATACATAATAAATAT AAATATGATGATCTTAATTCTGGCATAATAATAAGTAACGATCTGATTTGCTTGGTGGGAATATCAAAAGGAACTACAACTATGGACAATGTGGAAAAGC AATAGGTGTGGACTTGCTGAACAACCCAGACCTTGTGGCGACTGACCCACTGATCTCATTCAAGACAGCGATATGGTTCTGGATGACACCACAGTCACCA AAGCCATCATGCCACGATGTCATCACCGGACTATGGAACCCATCAGACAGTGATAGGGCAGCAGGGCGGCTTCCTGGATACGGCACTGTCACCAATATCA TCAATGGTGGCCTTGAATGCGGCATTGGGCAGGATAGCAGGGTGCAAGATCGTATCGGATTTTACAAGAGATATTGTGACTTGCTTGGCATTTCCTATGG CACCAACCTTGACTGTTCTTCCCAGAGGCCATTTGGCTCTGCACTGGACACAATGTAGCAAGAGAGTGTTGAGTGTTTTCTCTTTTCTGTTGAGAAACAC TTCCGAGATCTCTATCTCTACTACTAAAGAAATAAAATGAAATAATCCAATCATAACTATCATTATTCTCTTTAGTGTTGAAGATGTTAGAATTTAACAA AACAAACTATTATTTAGGCAGCAACACTAGCACTCAAAAATACTATTAAACACAACACTAATTCTCTCCTTATAGTATATCTTGTCAAGGCAAGTCAAGA AACGAACAATCTAATTTTAGTCCAACGCTTCAAGCCTATAGGGTCCAACGTCTTCTTGGGCAACCAGGAAAGAAGGGCGTGAGTACACAAGCAAACATGT ATTGTGATGTGTAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_162138; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338334
| Blastp | Endochitinase from Phaseolus with 65.52% of identity |
|---|---|
| Blastx | Chitinase 12 from Oryza sativa with 71.65% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_015951276.1) |
| Pfam | Chitin recognition protein (PF00187.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |