| Id Trinity | TRINITY_DN48567_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_336937 |
| Sequence | AGAAAAGAAACGAAAATGTGAGGTCACAGAAACAGCTTTATCTCCTTTTTCTGACTTCGCTTCCATCCCCTTTCATAGTAATGATTCTGCACCTTACTCT TTTATCTCTTTTCTCACTAATCCAAACAAAAAACAAAACTTGAATACCCTCCCTCATCTAATCTACCTTCTTCATCTTTCTCTCTCTCTATCTCACGCGC ATATAAAGTAATATAGTAGTTCAATTTTAATGCTTTTCCATCACCCTCTTTCACTGCCTATGTAAAATATTTGTATCTATCAAATGTGTTGCAGAAAGTT GTGTTTCTCAGATCCCTATATTACTCACAGAAAACGATACAACACCTTTCACCCTCTCTCTCTCTCTCTTTCCCCTCATATTTCTCTTTCAAATCATATA TACATATATTTATATAGTGTGGTCCTTAACCTCAGTATCACGCGCATATTATTCTGAATTCCCTGCTTTTGCTTTTATCGATCGCTTGTGATATTGAGTT GAGGAAGGAAATAATGCAAGAACCAAACTTGGGAATGATGGGTGGTGGTTTGGGTGGAGACGGCGGCGGCGACACCCAAAACCGACAACTGAAGGCGGAG ATAGTTACTCACCCTCTCTATGAGCAGCTTCTAGCAGCACACGTGGCATGTCTCAGAGTTGCAACTCCAATAGATCAATTACCACTCATTGATGCTCAGT TATCACAGTCTCACCATCTTCTTCGCTCTTATCTTTCTCAACAAACTCATTCTCTTTCACCTCACCATCGCCAAGACCTTGACAACTTCATGGCACAATA TTTGATAGTGTTGTGTACTTTCAAAGAACAGCTTCAACAACATGTTAGAGTCCATGCCGTCGAGGCTGTCATGGCTTGCCGTGACATTGAAAATACCTTA CAAGCTCTCACAGGTACATTCCCACTATGCTTTTTTTTTCAGTTGCTATTTTTATTATTTTATCCCTTCAACCTATCATAAACTTGATGCAATTATTGAT TAAAAAAGACTATCAATGGTTAGATATACACATATTTACCAAAGTTATGATGTTGTTTCTTGTGATAATATTTTTGATTAGTAATAAAAAAGTAATAATC TATTTTTAAGTATATATGCATATACAACTTTGCTATTTTTTGTGGGTAATTGGGTCGAGATAGAGTTTCTCTTTTGGTATAAAATTAGTTTTCTTACTAT ATATGACAGTCTTTTAACCATATGCAATTTGTTTTAATTCTTTCTGTCTCGTCTTTGAAGCGGTTTGGAAGAAAGGTAGAAGATATTAATTAACTGTGCC AGTGTGTGGTTTATATATATAGTTGCATATATTTTTTGTTTGGTAGATTTAGGCTTATGCTGAAGAAAATGGGGGTGGGTGGAAGGGTGTAGTATACAAA AATGGAAATAGAAACCGAAAAGGTTAGTTAGTTTGATGAGAAATGACACCCACTCCCACCTTGGCATCTCCAACAACCTCTAATGCCGTAACTCACTAAC CTTCCTTCCAGAGAGGAAATTTCGTCACTCTTATTTTTCTTGCATTAGTTTCTTCATAATTTTCTAGCATTGTGTTTGTGTATTTTACTTGTGCTTGCAT TTGATATTAATTGAATAGAAGTGTGAGTATAGATCAGACATACAAATTATACAAATAACGAGGTGACAAATCTTTATATTTTCCATCTGAATTATTTGAG ATTGACTGTTAAGTATATACTTCAGTGTAGAGCTTCTAGATTTACTTGAGGGCTGTGAATAACAATGTACCATGTTTTTTTGAAAAACACGTTTTTTATA TTGAATAAAAATGCCACACTCTCTTATTTTATTTTAATTATATATGTTACACAAAGTGCGATGCATAGGGTAATAATCAAAGAAAATATGTTATAGTGAA TGTATAAAAAAGTTTACCAATAATGTAACGAAAATTATTTTGTTAGAATTTCTTATGTGTTATTAACAAAGTCTGATTTTTCTGTGCAAAAATATTTAGT ATTTCCCGAAATTCTTGTATGCATAAGCAGCCATATGACTAATTACTGATGTTAATAATTGATGTTATGAACACACATAGCTGTCTAAATGGAATGAAGA CGACAGTATAATAATTTCAGTTGTCCTGGTCAATGGCACCTGTCAATTATAATTGAGATTATAGATATCTTTAACACATGGTTAATGTTCTAGATCCCTT CCATATTCATTTTGAACTTCAATTTTTAGTTTATTCAAATCTCTTACAAAGTTAATAACATATTATTCTTTTTTGTCACTATTATCTATAATTTCCTTTT TTCACTCTCATAGTGGCAAATTAAACATGAGTTGATGTGCGTGCTATTTCATTTATTATGTATAAACCACAGTGTTTCTAAAATGGATTGGGGTTACTTG TCCCAAAACATGTCTCCAACCATATCCCCAATTATGTATCAAGCCAATCAGAATGAAGAAAAAATAAATGAAAATATGAATGTTTAATTTTTTTGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_162155; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_336937
| Blastp | Homeobox protein knotted-1-like 7 from Arabidopsis with 73.57% of identity |
|---|---|
| Blastx | Homeobox protein HD1 from Brassica with 76.99% of identity |
| Eggnog | homeobox(ENOG410XPMQ) |
| Kegg | Link to kegg annotations (AT1G62990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422213.1) |
| Pfam | KNOX1 domain (PF03790.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |