| Id Trinity | TRINITY_DN48567_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_336940 |
| Sequence | AGAAAAGAAACGAAAATGTGAGGTCACAGAAACAGCTTTATCTCCTTTTTCTGACTTCGCTTCCATCCCCTTTCATAGTAATGATTCTGCACCTTACTCT TTTATCTCTTTTCTCACTAATCCAAACAAAAAACAAAACTTGAATACCCTCCCTCATCTAATCTACCTTCTTCATCTTTCTCTCTCTCTATCTCACGCGC ATATAAAGTAATATAGTAGTTCAATTTTAATGCTTTTCCATCACCCTCTTTCACTGCCTATGTAAAATATTTGTATCTATCAAATGTGTTGCAGAAAGTT GTGTTTCTCAGATCCCTATATTACTCACAGAAAACGATACAACACCTTTCACCCTCTCTCTCTCTCTCTTTCCCCTCATATTTCTCTTTCAAATCATATA TACATATATTTATATAGTGTGGTCCTTAACCTCAGTATCACGCGCATATTATTCTGAATTCCCTGCTTTTGCTTTTATCGATCGCTTGTGATATTGAGTT GAGGAAGGAAATAATGCAAGAACCAAACTTGGGAATGATGGGTGGTGGTTTGGGTGGAGACGGCGGCGGCGACACCCAAAACCGACAACTGAAGGCGGAG ATAGTTACTCACCCTCTCTATGAGCAGCTTCTAGCAGCACACGTGGCATGTCTCAGAGTTGCAACTCCAATAGATCAATTACCACTCATTGATGCTCAGT TATCACAGTCTCACCATCTTCTTCGCTCTTATCTTTCTCAACAAACTCATTCTCTTTCACCTCACCATCGCCAAGACCTTGACAACTTCATGGTAATACT AATAATACTACCACTACTACTATACCATCTCATATTCGTAAACCAAAAATTGGTAATTTTTAAGGGTTTAATGATCTCTTATGCTTCATTTGTGCTAACA AAATAGGATTTCACTGCATCCATATATGCTGTTATTGTTACCATTGCAGGCACAATATTTGATAGTGTTGTGTACTTTCAAAGAACAGCTTCAACAACAT GTTAGAGTCCATGCCGTCGAGGCTGTCATGGCTTGCCGTGACATTGAAAATACCTTACAAGCTCTCACAGGTACATTCCCACTATGCTTTTTTTTTCAGT TGCTATTTTTATTATTTTATCCCTTCAACCTATCATAAACTTGATGCAATTATTGATTAAAAAAGACTATCAATGGTTAGATATACACATATTTACCAAA GTTATGATGTTGTTTCTTGTGATAATATTTTTGATTAGTAATAAAAAAGTAATAATCTATTTTTAAGTATATATGCATATACAACTTTGCTATTTTTTGT GGGTAATTGGGTCGAGATAGAGTTTCTCTTTTGGTATAAAATTAGTTTTCTTACTATATATGACAGTCTTTTAACCATATGCAATTTGTTTTAATTCTTT CTGTCTCGTCTTTGAAGCGGTTTGGAAGAAAGGTAGAAGATATTAATTAACTGTGCCAGTGTGTGGTTTATATATATAGTTGCATATATTTTTTGTTTGG TAGATTTAGGCTTATGCTGAAGAAAATGGGGGTGGGTGGAAGGGTGTAGTATACAAAAATGGAAATAGAAACCGAAAAGGTTAGTTAGTTTGATGAGAAA TGACACCCACTCCCACCTTGGCATCTCCAACAACCTCTAATGCCGTAACTCACTAACCTTCCTTCCAGAGAGGAAATTTCGTCACTCTTATTTTTCTTGC ATTAGTTTCTTCATAATTTTCTAGCATTGTGTTTGTGTATTTTACTTGTGCTTGCATTTGATATTAATTGAATAGAAGTGTGAGTATAGATCAGACATAC AAATTATACAAATAACGAGGTGACAAATCTTTATATTTTCCATCTGAATTATTTGAGATTGACTGTTAAGTATATACTTCAGTGTAGAGCTTCTAGATTT ACTTGAGGGCTGTGAATAACAATGTACCATGTTTTTTTGAAAAACACGTTTTTTATATTGAATAAAAATGCCACACTCTCTTATTTTATTTTAATTATAT ATGTTACACAAAGTGCGATGCATAGGGTAATAATCAAAGAAAATATGTTATAGTGAATGTATAAAAAAGTTTACCAATAATGTAACGAAAATTATTTTGT TAGAATTTCTTATGTGTTATTAACAAAGTCTGATTTTTCTGTGCAAAAATATTTAGTATTTCCCGAAATTCTTGTATGCATAAGCAGCCATATGACTAAT TACTGATGTTAATAATTGATGTTATGAACACACATAGCTGTCTAAATGGAATGAAGACGACAGTATAATAATTTCAGTTGTCCTGGTCAATGGCACCTGT CAATTATAATTGAGATTATAGATATCTTTAACACATGGTTAATGTTCTAGATCCCTTCCATATTCATTTTGAACTTCAATTTTTAGTTTATTCAAATCTC TTACAAAGTTAATAACATATTATTCTTTTTTGTCACTATTATCTATAATTTCCTTTTTTCACTCTCATAGTGGCAAATTAAACATGAGTTGATGTGCGTG CTATTTCATTTATTATGTATAAACCACAGTGTTTCTAAAATGGATTGGGGTTACTTGTCCCAAAACATGTCTCCAACCATATCCCCAATTATGTATCAAG CCAATCAGAATGAAGAAAAAATAAATGAAAATATGAATGTTTAATTTTTTTGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_162155; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_336940
| Blastp | Homeobox protein knotted-1-like 7 from Arabidopsis with 65.71% of identity |
|---|---|
| Blastx | Homeobox protein HD1 from Brassica with 72.6% of identity |
| Eggnog | homeobox(ENOG410XPMQ) |
| Kegg | Link to kegg annotations (AT1G62990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422212.1) |
| Pfam | KNOX1 domain (PF03790.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |