Ll_transcript_337180

• Id Trinity: TRINITY_DN48570_c5_g3_i10
• Name Transcript: Ll_transcript_337180
• Sequence: AGTTTTGGGTGAAAATTGTTGGGCTTCATATTTCCACCAAGCTTCAATTGGAACTCACCTTACTTACCGGTTTCTTTCACATCCATCTGGGAGATACAAG GGTTCATATGTTACTGGATCTTCGTGCATAGGAGAAGGCACAGTCAACTTACTCAGGCCTGTGCCAGAATCCTCTGTAGATCTAGCAGAATATGTAAAGA AGTTTTTGGCTGGTCTTCCATCTACAACAATCATCACTATAAGTGTGCTTGAACGTGATTATACTGGTTTACTACAGGAGTTGTTGCTTTATCCTACATG TGTTCAAGCATGGATGCTGGTGTCCCGACTGAGTTTTAAGAGTGAACCTATTGTAATGTTACTGCCACTGGATTCTATTTTACAAGCTTCAGATGAAGAT GATTTAAGTATTGGTTCGGGCACACTTCCTAGTTGTGAGAAACCTAGCAACACCTGGCATTGTCCATGGGGTTTTACAGTGGTTGATGATGTAGCTCCAG CATTCAAAACAATTTTGGAAGGGAATTACTTATCATCAACATCCAATGTTGAAGATACAGCACACAATAGGATGTTATGGTGGAAGCGGAGAAAAAACCT TGATCACAGTCTTGATAAATTTCTGAGGAACCTTGAAGATTCATGGTTTGGTTCATGGAAATGCTTGCTTCTTGGGAAAATGTTGAACTGCAATAATTTC GACTCGGTGCTTAAGAATCTTGTGAATGATCTAAGATCTAAATGCAAATTAGATGTAAATGAGGATCTTGTTAGAGTTATTCTTGGAGGGTCCAAATATA TGCATGAGGGGGAAATGCTGGTTTCACAGCTATGCTTAAAGAAAGATTGCTACATTGCTCAAGTGGGTTATTGTGATGAAGCAAGGGGTGGGATATTGTC AAATGCAGCCAATGGGTTTGGAATGTCATCTGGGGTTGCTTTTAATTTATTAAGTGAAGCACTAAATGTGCTGGAAGTGAATGACTCTGTAAATAGAGAG CCAATAATTCTTGTGTTGGATTATGAAGTGCAGATGCTTCCTTGGGAAAATTTACCCGTACTAAGAAATCATGAGGTTTATCGCATGCCCTCAGTTAGCA GCATCTCTGCAGTTCTTGATAATAAAGCCAGCAACCACCAGGAGCAAGTGGAAAGGAATTTAGTGCCCTTTCCTGCTATAGATCCACTGGATGCTTTCTA TTTATTAAATCCAGACGGTGATCTCTCTGACACTCAAATCGCATTTGAAAGTTGGTTTAGAGATAAAAACCTGGAGGGAAAGGCAGGTTCCAAGCCCACC ATTGGAGAACTGGCTTCAGCATTGAAAAGTCATGACCTTTTTATATATTTTGGTCATGGAAGTGGATCACAGTACATTCCTAGGCATGAGATTCAGAAAC TAGAGAATTGTGCTGCTACGCTTCTGATGGGGTGCAGTAGTGGTTCATTGACCTTAAATGGGAGCTATGCGCCACAAGGTGTGCCCTTGTCATATCTGCT GGCTGGTTCTCCAGCCATTGTTGCCAATCTGTGGGAAGTGACAGACAAGGATATAGATCGATTTGGTAAGGCTATGTTTGATGCATGGCTGACAGAAAGA TCAGACCATCCAACGGAATGCTTGCAATGCAAGTTATTGTCAGAAGAATTTGAGGCCCTGAACTTGAAAGGCGGCAAGGGTAAAGCGAAAAGGAAAGTTC CAAAGAAGAAATTGCAAGAATTGGCTGAAACTGATTCACATAACTGTTGTCACAGACGCAAAATTGGAGCTTTCATGGGCAAGGCACGCAGTGTTTGCAC CCTTCCTTTCTTGACAGGGGCATCACCAGTATGCTATGGCGTCCCTACTGGAATTTGGAGGAAAAAGAATGTTTAGCCTGATCAAGCCAACAATAGAGTT CATCTACGCTACATGGCTCGATCCCTAACAATTATTGGGAAGAACTAAAAAGATAGAATCCGACAATTCACCAACTCAGCTGACAAACCAGCAATCATAC AATACTGACTTCTAACTGTCCATAGATGTGATTCTTTTCCCATGTGCAATTGGAATGTGAACAAAATAGTGAAAATTCAAAATACAATACCCTTTACTAT AAGTAAGATTGATATTATTGTACATGTGATAATTGTATTGCCATAAGATCAGAAAGTTTCATGTTCCTTGTGAACCACACTCTAGCCATTATGATATTTC AAAACCCTTAAAATCTGGCATGTGTATTCAAAAACTTGAGTTCTTGAAAGGATACTTTTGATAGAGGCTTGCCAATGATCCTTT
• Tissue: pods
• Gene name: LI_gene_162190;
• Additional information: details;

Expression of Ll_transcript_337180

FPKM

• PAB: 0.2
• PNAB: 3.8
• PS1: 3
• PS2: 0.9
• PS3: 3.3
• PW1: 1.1
• PW2: 0.9
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337180

• Blastp: Separase from Arabidopsis with 53.24% of identity
• Blastx: Separase from Arabidopsis with 53.24% of identity
• Eggnog: extra spindle pole bodies homolog 1 (S. cerevisiae)(COG5155)
• Kegg: Link to kegg annotations (AT4G22970)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425826.1)
• Pfam: Peptidase family C50 (PF03568.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;