Id Trinity | TRINITY_DN48570_c5_g3_i16 |
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Name Transcript | Ll_transcript_337194 |
Sequence | ACATCCATCTGGGAGATACAAGGTTTAACAGAAATACACACACAAGTGCTGATTGTCAAAAGTATTACTGGCACAATGATGAGTATGATTTTTCATTTTT CTTTCAATGTCATTTGCTGCTTTTGTGGTATGTGACAAGCCACCAACCCAATTTGTTAATGACAAAAGTCCCATTTTAGGGTTCATATGTTACTGGATCT TCGTGCATAGGAGAAGGCACAGTCAACTTACTCAGGCCTGTGCCAGAATCCTCTGTAGATCTAGCAGAATATGTAAAGAAGTTTTTGGCTGGTCTTCCAT CTACAACAATCATCACTATAAGTGTGCTTGAACGTGATTATACTGGTTTACTACAGGAGTTGTTGCTTTATCCTACATGTGTTCAAGCATGGATGCTGGT GTCCCGACTGAGTTTTAAGAGTGAACCTATTGTAATGTTACTGCCACTGGATTCTATTTTACAAGCTTCAGATGAAGATGATTTAAGTATTGGTTCGGGC ACACTTCCTAGTTGTGAGAAACCTAGCAACACCTGGCATTGTCCATGGGGTTTTACAGTGGTTGATGATGTAGCTCCAGCATTCAAAACAATTTTGGAAG GGAATTACTTATCATCAACATCCAATGTTGAAGATACAGCACACAATAGGATGTTATGGTGGAAGCGGAGAAAAAACCTTGATCACAGTCTTGATAAATT TCTGAGGAACCTTGAAGATTCATGGTTTGGTTCATGGAAATGCTTGCTTCTTGGGAAAATGTTGAACTGCAATAATTTCGACTCGGTGCTTAAGAATCTT GTGAATGATCTAAGATCTAAATGCAAATTAGATGTAAATGAGGATCTTGTTAGAGTTATTCTTGGAGGGTCCAAATATATGCATGAGGGGGAAATGCTGG TTTCACAGCTATGCTTAAAGAAAGATTGCTACATTGCTCAAGTGGGTTATTGTGATGAAGCAAGGGGTGGGATATTGTCAAATGCAGCCAATGGGTTTGG AATGTCATCTGGGGTTGCTTTTAATTTATTAAGTGAAGCACTAAATGTGCTGGAAGTGAATGACTCTGTAAATAGAGAGCCAATAATTCTTGTGTTGGAT TATGAAGTGCAGATGCTTCCTTGGGAAAATTTACCCGTACTAAGAAATCATGAGGTTTATCGCATGCCCTCAGTTAGCAGCATCTCTGCAGTTCTTGATA ATAAAGCCAGCAACCACCAGGAGCAAGTGGAAAGGAATTTAGTGCCCTTTCCTGCTATAGATCCACTGGATGCTTTCTATTTATTAAATCCAGACGGTGA TCTCTCTGACACTCAAATCGCATTTGAAAGTTGGTTTAGAGATAAAAACCTGGAGGGAAAGGCAGGTTCCAAGCCCACCATTGGAGAACTGGCTTCAGCA TTGAAAAGTCATGACCTTTTTATATATTTTGGTCATGGAAGTGGATCACAGTACATTCCTAGGCATGAGATTCAGAAACTAGAGAATTGTGCTGCTACGC TTCTGATGGGGTGCAGTAGTGGTTCATTGACCTTAAATGGGAGCTATGCGCCACAAGGTGTGCCCTTGTCATATCTGCTGGCTGGTTCTCCAGCCATTGT TGCCAATCTGTGGGAAGTGACAGACAAGGATATAGATCGATTTGGTAAGGCTATGTTTGATGCATGGCTGACAGAAAGATCAGACCATCCAACGGAATGC TTGCAATGCAAGTTATTGTCAGAAGAATTTGAGGCCCTGAACTTGAAAGGCGGCAAGGGTAAAGCGAAAAGGAAAGTTCCAAAGAAGAAATTGCAAGAAT TGGCTGAAACTGATTCACATAACTGTTGTCACAGACGCAAAATTGGAGCTTTCATGGGCAAGGCACGCAGTGTTTGCACCCTTCCTTTCTTGACAGGGGC ATCACCAGTATGCTATGGCGTCCCTACTGGAATTTGGAGGAAAAAGAATGTTTAGCCTGATCAAGCCAACAATAGAGTTCATCTACGCTACATGGCTCGA TCCCTAACAATTATTGGGAAGAACTAAAAAGATAGAATCCGACAATTCACCAACTCAGCTGACAAACCAGCAATCATACAATACTGACTTCTAACTGTCC ATAGATGTGATTCTTTTCCCATGTGCAATTGGAATGTGAACAAAATAGTGAAAATTCAAAATACAATACCCTTTACTATAAGTAAGATTGATATTATTGT ACATGTGATAATTGTATTGCCATAAGATCAGAAAGTTTCATGTTCCTTGTGAACCACACTCTAGCCATTATGATATTTCAAAACCCTTAAAATCTGGCAT GTGTATTCAAAAACTTGAGTTCTTGAAAGGATACTTTTGATAGAGGCTTGCCAATGATCCTTT BLAST |
Tissue | pods |
Gene name | LI_gene_162190; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337194
Blastp | Separase from Arabidopsis with 55.6% of identity |
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Blastx | Separase from Arabidopsis with 53.95% of identity |
Eggnog | extra spindle pole bodies homolog 1 (S. cerevisiae)(COG5155) |
Kegg | Link to kegg annotations (AT4G22970) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425826.1) |
Pfam | Peptidase family C50 (PF03568.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |