Id Trinity | TRINITY_DN48577_c1_g1_i1 |
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Name Transcript | Ll_transcript_337205 |
Sequence | AACAACAACAACACACTACACACTACACACTACAATGTCCAACAATAACAACCTCGGATCTCTCCTCCTTCGCCACCACCACCACCACCACCATTCCAAG TCCGCCACCACTCTCCGCCTCTGCCACTCCTCCTTCCGCCGCATCATCTTCCACTCCATCACCTGCGGCTCCCTCTCCCGCCACCGCCGTCACACCACAT CGCCGCCCATATCGGAGGACGACGACGACGACGACGACATCCCCCAAGACGAAACCGCGGCGAGACCGGAGACGAGGTTGTCGGAGAAGCTGTCGGATCT GTTGAACATGGAAGAGACGGAGACGAAGGAGGAGGCGTTGGAGGAGCTGAAGAAGGTGGTGAAGGAGTTGCAGGAGGATACACGGCGGAGAGTGGCGGCG GCGGCTATGGTGAGGAAGGTGGCGAAGGAAGATGTGGAGGTTAGAGAAACTCTTGCAATGCTTGGAGTCATTCCTTCAATAGTTGCAATGATTGATTCTG AACAAGATGTTGATTCTCAGATCGCTTCTCTCTATGCTTTGCTCAATCTCGGAATCGGAAATGATGCGAATAAAGCAGCAATTGTTGAAGTTGGTGCTGT TCAGAAGATGCTCAAGCTGATTGAGTTACCAGGGGGTCCAAATTCACTAGTCTCTGAAGCAATTGTCGCAAATTTCCTCGGATTGAGTGCTTTGGATTCG AACAAACCAATAATTGGGTCCTCAGCTGCAATACCGTTCCTAGTTAGAACCCTTCAGAGTTTAGATGATAAAACTAGCCCCCAAGCTAAGCAAGATGCTC TCAGAGCACTATACAATCTTTCGATCTTTCCAGGCAATGTTTCATGCATTTTGGAAACCAATTTGGTCCATTTTCTGGTAAACTCAATAGGAGATATGGA ATTAACGGAGAGAACCCTCTCAATTTTAAGCAACTTGGTATCAACTCGAGAGGGTAGGAAAGCTATTAGTGCGGTGCCGGATGCGTTCCCTATCTTGGTG GATGTGTTGAATTGGACTGATTCACCGAAATGCCAAGAGAACGTGTCGTACATTTTGATGGTCATGGCGCACAAGTCCTATGGTGACAGGCAGGCCATGA TTGAGGCTGGGATCGCTTCATCGTTGCTTGAATTGTCCCTTTTGGGTACCACATTGGCCCAGAAAAGGGCGTCGAGGATATTGGAATGTTTGAGGGTAGA CAAAGGGAAGCAGGTTTCCGGGAGCTTCGGTGGAAACTTGGGTGCAAATGTATCAGCTCCTATTTATGGCTCTTTGGCATCTTGCGCAAAAAGAGATGGA GAAGGGGCAGAGTGTTTGGAGGAGGAGGAAGATATGATGAGTGAGGAGAAGAAAGCAGTGAAACAGTTAGTCCAGCAGAGTTTGCAAAACAACATGAGGA AGATTGTAAAACGGGCCAATTTGCCTCAAGATATTGATCCGTCTGATCATTTTAAGTCACTCACTTCAAGTTCAACTTCGAAGAGCCTGCCGTTTTGAAG AATTGCAGTTGCTGAAGAGAGTCGGGATTGAAGAGAATGAACCATGAAATCTAAATGGCATGGAAGGATTAAATACAACATGGATCTGGTTATGGTATAT AAAGTTGATCTATTCTCATAAATAAAGTAATGAAGATCATTTTGTCCTTGTAGG BLAST |
Tissue | pods |
Gene name | LI_gene_162268; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337205
Blastp | U-box domain-containing protein 12 from Oryza sativa with 35.61% of identity |
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Blastx | U-box domain-containing protein 7 from Arabidopsis with 31.22% of identity |
Eggnog | Ubox(ENOG410ZJYS) |
Kegg | Link to kegg annotations (4339839) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438783.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |