Ll_transcript_337224

• Id Trinity: TRINITY_DN48577_c1_g1_i15
• Name Transcript: Ll_transcript_337224
• Sequence: CTAAATGATACTATTTCTCATCACTCTCCATTCTCAAAAGCATAACTAACTAACCTTTCCATAATTTCTATAAAAAAAAACTCTTTTTCTCTTTCTCTTC TAAGTAATGTAGGTCGTCGGAGAATGGCAAAATGTCACCGTAACAACGTTGGATCTATCGCTCTCGACCACCGCCACGCCACCAAAACCTCAACCTCCGG CGGCCATTTCCGCCTCTGGAATTCCACACTCCGCCGCATCATCTTCGACGCCGTCAGCTGCGGCAGCACCTCTCGCTACAAGTACGACAACGATGACGAC GACGGCGACATAACCTCAACCGCGTCAACGAGCCGCCGGGAGAATCACGCGGAGGATCCGAAAACGGAGAAGAATGTTACGAACGTAGCGGAGAATGAAA CGGAAGCGTCGAGGAAGAAGAAGGAAGAGGAATTGAGGGAGATGAAGGAAATGGTGAAGGAGTTGGAGGGAGAGGATTTGATGAAGAAGAGAATTGCAGC GAAGAGAGTGAGGAAGTTGGCGAAGGAAGAAGGATTGGAAGTGAGAGGAACACTTGCAATGTTGGGAGTGATTCCTCTACTTGTTGGAATGGTTGATCAT GATGAAAATTCCGTTAAATCTCAGATTGAGTCTCTCTATGCATTGCTCAATCTCGGAATCGGAAATGATGCAAATAAAGCAGCTATTGTCAAAGTTGGTG CAGTTCACAAAATGCTAAAGCTTATTGATTCCTCAGATTCATCAGTGTGTGAAGCAGTAGTTGCAAATTTCCTTGGATTGAGTGCTTTGGATTCTAACAA ACCTATAATCGGATCCTCGGGTGCAATACCGTTCTTAGTTAGAATCCTTCGAAATTTAGATAATAAAAGTAGCTCTCAAGCTAAGCAAGATGCTCTCCGA GCTTTGTACAATCTTTCAATCACTCCAACCAACATTTCATTTGTTTTGGAAACTGATTTGGTCTCATTTCTCATAAACTCAATAGGAGACATGGAAATAA GTGAAAGAGTCCTCTCAATCCTAAGCAATTTGGTGTCAACACCAGAGGGTAGAAAAGCTATCAGTACTGTAAGGGACGCAATCCCGATTCTGATGGATGT ATTGAATTGGACAGATTCCCCAAAGTGCCAAGAGAAAGCATCATACATTTTGATGATTATGGCACATAAATCTTGTGGCGACAGACACGCCATGATTGAG GCAGGGATTGCGTCAACACTTCTTGAGTTGACACTTGTGGGAACCCCGTTGGCGCAGAAAAGAGCCTCAAGGATATTGGAATGTTTGAGGATAGATAAAG GGAAGCAGGTTTCTGGGAGTTATGGTGGAAACTTGGGTGCAACTGTGTCCGCGCCAATTTGTGGCTCTTCATCATCTTTTACAAAGACGGAGGGAAGAAG CGTGGAGGACGAAGATATGATGAGCGAGGAGAAGAAAGCAGTGAAGCAATTGGTCCAGCAAAGTTTGCAGAACAACATGAGGAAAATTGTGAAGAGGGCC AATTTGCGTCAAGATTTCATTCCATCGGAGCGTCTTAATTCACTCACTTCGAGTTTGACTTCAAAGAGCCTGCCTCTTTGAACAATTGCAGCTGCTCTAG ATGGGAGTCAAGTTTGTAAAGAATGAACATGAAGGTTAATCTTCAGATCATGATTTTACTGAGCTTATGGGCTTGTAGCTATTTGCAAATTGTTAGCACT GATATCAAGTTACCACTTGTCATAGTCTTAGTAGGTAATTATATAAGTATTTCTAGTTTAAATCTCTCTCGGTTTTTTTGTTTTTGGGTTTTGTAAAGGG CATTATGTTTCTTTTGCATGAGTATGAATCCATCAAACATGAAAAGATCACTGTTAATAAATTGAAAATGAGGCATAGACATTGCAAGCTATAAACATGA AAAGATCATTGTGTAGTGAATGATATGCTGTGCAAAATTTTGAAATTATAATGACCAAAATTAAAAGAAATAAATAATAATGACTAATTAAAATTCAATA AATT
• Tissue: pods
• Gene name: LI_gene_162268;
• Additional information: details;

Expression of Ll_transcript_337224

FPKM

• PAB: 0.4
• PNAB: 12.8
• PS1: 19.7
• PS2: 19.2
• PS3: 30.9
• PW1: 6.2
• PW2: 2.4
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337224

• Blastp: U-box domain-containing protein 4 from Arabidopsis with 31.05% of identity
• Blastx: U-box domain-containing protein 12 from Oryza sativa with 33.82% of identity
• Eggnog: U-box domain-containing protein 4-like(ENOG410XU9Y)
• Kegg: Link to kegg annotations (AT2G23140)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437790.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;