Ll_transcript_337228

• Id Trinity: TRINITY_DN48577_c1_g1_i18
• Name Transcript: Ll_transcript_337228
• Sequence: AACAACAACAACACACTACACACTACACACTACAATGTCCAACAATAACAACCTCGGATCTCTCCTCCTTCGCCACCACCACCACCACCACCATTCCAAG TCCGCCACCACTCTCCGCCTCTGCCACTCCTCCTTCCGCCGCATCATCTTCCACTCCATCACCTGCGGCTCCCTCTCCCGCCACCGCCGTCACACCACAT CGCCGCCCATATCGGAGGACGACGACGACGACGACGACATCCCCCAAGACGAAACCGCGGCGAGACCGGAGACGAGGTTGTCGGAGAAGCTGTCGGATCT GTTGAACATGGAAGAGACGGAGACGAAGGAGGAGGCGTTGGAGGAGCTGAAGAAGGTGGTGAAGGAGTTGCAGGAGGATACACGGCGGAGAGTGGCGGCG GCGGCTATGGTGAGGAAGGTGGCGAAGGAAGATGTGGAGGTTAGAGAAACTCTTGCAATGCTTGGAGTCATTCCTTCAATAGTTGCAATGATTGATTCTG AACAAGATGTTGATTCTCAGATCGCTTCTCTCTATGCTTTGCTCAATCTCGGAATCGGAAATGATGCGAATAAAGCAGCAATTGTTGAAGTTGGTGCTGT TCAGAAGATGCTCAAGCTGATTGAGTTACCAGGGGGTCCAAATTCACTAGTCTCTGAAGCAATTGTCGCAAATTTCCTCGGATTGAGTGCTTTGGATTCG AACAAACCAATAATTGGGTCCTCAGCTGCAATACCGTTCCTAGTTAGAACCCTTCAGAGTTTAGATGATAAAACTAGCCCCCAAGCTAAGCAAGATGCTC TCAGAGCACTATACAATCTTTCGATCTTTCCAGGCAATGTTTCATGCATTTTGGAAACCAATTTGGTCCATTTTCTGGTAAACTCAATAGGAGATATGGA ATTAACGGAGAGAACCCTCTCAATTTTAAGCAACTTGGTATCAACTCGAGAGGGTAGGAAAGCTATTAGTGCGGTGCCGGATGCGTTCCCTATCTTGGTG GATGTGTTGAATTGGACTGATTCACCGAAATGCCAAGAGAACGTGTCGTACATTTTGATGGTCATGGCGCACAAGTCCTATGGTGACAGGCAGGCCATGA TTGAGGCTGGGATCGCTTCATCGTTGCTTGAATTGTCCCTTTTGGGTACCACATTGGCCCAGAAAAGGGCGTCGAGGATATTGGAATGTTTGAGGGTAGA CAAAGGGAAGCAGGTTTCCGGGAGCTTCGGTGGAAACTTGGGTGCAAATGTATCAGCTCCTATTTATGGCTCTTTGGCATCTTGCGCAAAAAGAGATGGA GAAGGGGCAGAGTGTTTGGAGGAGGAGGAAGATATGATGAGTGAGGAGAAGAAAGCAGTGAAACAGTTAGTCCAGCAGAGTTTGCAAAACAACATGAGGA AGATTGTAAAACGGGCCAATTTGCCTCAAGATATTGATCCGTCTGATCATTTTAAGTCACTCACTTCAAGTTCAACTTCGAAGAGCCTGCCGTTTTGAAG AATTGCAGTTGCTGAAGAGAGTCGGGATTGAAGAGAATGAACCATGAAGTTAGTCTTCACACCATAATTTTGTCGAGCTTTTAGGATTCTGTAGTTATTT GCTAGTGCTGATAAAATAGCCATTGCTTGTCATAAACTTAGTACATAATTATAAAATTACTTGGATTTGGATCATCTCCTGTTTCCGAATAACGGGGTAT GGTCTTGATAAAGAAAGAAAGACACACACTTTTTCATGTAAATAGGGGTTCATTAATTTCATTTCTAAAAAATTGTGTCTTTCCCTTTCCAACAGGACAA TGTATCCAAATCCGAAGTATTCTATTCTTAAGTTTCTGTTTTGGTCGCATTCTTTTTGGTTGCTTTGTTTGTTGGTGTGTTCAAGGGGCAATTTTTCCTT TCTGTTGCATCACTATGCATCAACCAACCAAGGAGGTACACTGTTTCAAAAAAACGGATAGCCACAATGACACTATATGTGATCATTGAATGACTCCAAT TCAGGGGCATGAAATGAAAAATTGGCCAATCTCGGGGTTGGTTCAGTCAAAAACCCATTACAAGTGTGTCCCTACATTCTAGGAGTCACTTTCAAATCAT GGTACACTTATGTCTCCCTATTGGACCCACAACATGTTTATGCTGGAAAGAAGGTGTCGGTCATTTTCTACATGTTTGTAAACAGGGAATAGTCACTGAA GTTTCCTATTTTAGAGAATCTTTCCCATGTTGTTTGGTTTCTCAGAATCTATGGATTATGTATTTGATGTAGTTTGTTCTGGATTAGAATCTTCTCATGT CATTTTTTTAACTCATGTGGATGAAAGAGATAGACACAAAGTTCATGAATGAAATTTCACAACCTAATAAATTTCATTTGTGTCTATCTCTCTTTTCTAG AGCTATCAATTCATGCTGTCCAACCAGGCCTGCCTCGGCTCAATTCAAGCTTCCCGACTAAGATCTGGTCGGCCTGATTTGGGCTCAGGCCTTGTAAAGA AAGCCCAGGTTATTTGTGCTGAAAACGGTTGCCTAAGCCCATTAGCAGACCAAGTTTGTAACACCATTGTATGGATTTCTGTGGTCTCGGCGAATCGGCC AATGGTCAAACTGGGTTTGGACTTCGGACCCTATCGAAACGGCCGAAATGACTTTGGCTCTATTCATAAGGGCTTTTAAGTACTTACGCCCTCCCATTTA CCGGACAGGTTCAGGCCCATGGGCTGGCTCATTTTTCTACCTCGACTCTCTTCCGAAATGACTTCGGCTCTGTTCTGTTTGATATACATTTGTAGTGAGA TTCAAAGATAACATTCCCTTAGTTTTATTATTACTTAAATGATTCATTAACTACCCTATGTTTATTTAATGCCAAATGATCTAGTTTACTTTACTGAATT AATTAATTTTTCTTTCAACTTTGTGTGCAGATCTAAATGGCATGGAAGGATTAAATACAACATGGATCTGGTTATGGTATATAAAGTTGATCTATTCTCA TAAATAAAGTAATGAAGATCATTTTGTCCTTGTAGGGTAAAGTTACAATAATGCTATCTTCTGCTGTGGTGGTTACTTTAATTTTGTTGACCTTAGTGTA AATATATTCTAGTGTTAATGTGACTTTAGTCTTAAAAAATATTATTAGATAACTCTTCCATAATGTGCCATTTAAGGGTTGATTTTCATTTACTTTTTTT TATTTTGCTTGGATCTGATCTTCAAAAAGAATCTTGCTGTGGAGGACATGATCCTAGTTTTGGTTGGAGCTATAGTGCTGCTAGTTTTGCTTCTATGGAA AGAAAGTTGAGAAGGATAATACCGATAATGGTCCATTTGCGAGTTGAGTATCGGATGAGGAGAAAGGGAAAAGAGAGACTTCAAAGTCATTTCATAATTG TATTTCATTTTCTTTCCCTCCAAAATCTAACTCGTAAACAGATCGTAAGAGTCAAAATCTATTAAGACCCTCTTAACTCATGTTTTAGGTTTGGATAATA TTTTTGTTTTTGATGTAGTCGCTATATTTTCTCATAAGAATAAAACATGTGTAATAGCTTATCAATAAAATTATAAGGTGTAGTAACATGGGTACATGTT TTTTTACTAATGGGAATCAGCACTAGAAGCACCAAAAAATCAC
• Tissue: pods
• Gene name: LI_gene_162268;
• Additional information: details;

Expression of Ll_transcript_337228

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.2
• PS3: 0.3
• PW1: 0.2
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337228

• Blastp: U-box domain-containing protein 12 from Oryza sativa with 35.61% of identity
• Blastx: U-box domain-containing protein 7 from Arabidopsis with 31.22% of identity
• Eggnog: Ubox(ENOG410ZJYS)
• Kegg: Link to kegg annotations (4339839)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438783.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;