| Id Trinity | TRINITY_DN48577_c1_g1_i24 |
|---|---|
| Name Transcript | Ll_transcript_337238 |
| Sequence | AAAAAACCATTCTCTATTTTAGTTTTTACACCACTATTTATTAAACGTAGCGTTATCAATGATAAAAAACGGTTCCCTATTCTATTTATCCATCTTTTTG AATTGGTTGAAATAGGGCCCAGACTTCATTTCTAAACCTAGAGTCATTCTCAGTCTTCACTCCCATTACAACCTCACAAGACCTTTCCCTTCTCTTTCTG GAGAATCTCCACTGCCACACCACCACCTTGAGCCACTTCATCTTTGAATCTCTGTTTGTTATCGGATCTTCTGAACGTAGAGGAGAATGAAACGGAAGGA AGTGGTCAAAGAGTTGGAAGAGAATGGCAGCGAAGAGAGTGAAGATTATGGCGAAGGAAGAACGGTTGGAAGTGAGAAGAACGCTTTCAATGCTTGGAGT GATTCCTCTACTTGTTGGAATGCTTGATCATGATAAAGAATGCGTTGACTCTCAGATCGCTTCACTTTACGCGTTACTCAATCTTGGAATCGGAAATGAT GCAAATAAAGCAGCCATTGTCAAAGTTGGCGCGATTCACAAGATGCTCGCGCTCATTGATTCCCCAGATTCATCAGTGTGTGAAGCAATTGTTGCAAATT TCCTAGGATTGAGTGCTTTGGATTCTAACAAACCAATAATTGGATCCTCAGGTGCAATACCGGTCCTAGTTAGAACCCTTCAAGATTTAGATAATAAAAG TAGCACCCAAGTTAAGCAAGATGCTCTCCGAGCTCTGTACAATCTTTCAATAACTCCAACCAACATTTCATTCATTTTGGAAACGGATTTGGTCTCATTT CTGGTAAACTCAACAGGAGACATGGAAGTAAGTGAGAGAATCCTCTCAATCCTAAGCAATTTGGTGTCAACTCCTGAAGGTAGAAAAGCTATCAGTGCTG TAAGGGATGCAATCCCAATTATGATGGATGTATTGAGTTGGACAGATTCACCACAATGCCAAGAGAAAGCATCATACATTTTAATGATTATGGCACACAA ATCCTATGGTGACAGGCACACCATGATTGAGGCAGGGATTGCATCACCATTGCTTGAGTTGACACTTCTCGGCACCCAATTGGCACAGAAAAGAGCCTCA AGGATATTGGAATGTTTGAGGCTGGATAAAGGGAAGCAGGTTTCTCGGCGCTACCGCGGAAACCTGGGTGCAACTGTGTCTGCACCTATTTGCGGCTCTT CATCATCATTTACAAAGACGGAGGGTAGAAGCCTGGAGGACGAAGATATGATGAGCGAGGAGAAGAAAGCAGTGAAGCAACTAGTCCAGCAAAGTTTGCA GAACAACATGAGGAAAATTGTGAAGAGGGCCAACTTGCATCACGATTTCGTTCCATCAGATCGATTTACTTCCTTCACTTCAAGTTCGACTTCAAAGAGC CTGGCACTTTGAAGAATTGAACCTGCTGAAGGGGAAAGCCAAGAGATTGAGCCATAAAGTTAGCCTTCACATCATGATTTTACTGAACTTTTGATCTTGT AGCTATTTGCAAATTATTAGCAATGTTATAATCGCTTGTCATAGTCTTAATAGATAATTATACAAGTAATTCTAGTATAAGTCTCTTTTGTTCTTTTAGA TATGTGCCAGGGCCATTATGTTTCTTTTGCCTTAGTATGAATCTATTAAACATTTCAAGATATATAAAAATGGAAAATCACCATCGTGTAGTGAATGGTA TGCTATGCAAAATTGGAATATTTGAGGGTTGTTCGAGTAACTTCACTCATACTATACTGCTACTACCATACCTACTTTGAAGGAGTCACTTTCAAACCGA AACACACTTTTGTCTTGACCCGACCCTACTGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_162268; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337238
| Blastp | U-box domain-containing protein 13 from Arabidopsis with 35.19% of identity |
|---|---|
| Blastx | U-box domain-containing protein 12 from Oryza sativa with 33.69% of identity |
| Eggnog | Ubox domain-containing protein(ENOG4110352) |
| Kegg | Link to kegg annotations (AT3G46510) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417584.1) |
| Pfam | Armadillo/beta-catenin-like repeat (PF00514.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |