| Id Trinity | TRINITY_DN48577_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_337212 |
| Sequence | TTGTGTTCTTGAAATTTTTGACATTATTCTTAACGAATAACAATATCGAGGTTCTAATCATATATACAAGCTCATATTTCAGAGGAGTACAATGATGAAA CACAAACAATTGTCAGAAATTTCTGCATATATTTATCACTTTACTTCCTTTGAGGACATATTGCATGGAGTTGTTGCTATAGATGTGTTAGATGGTAATT ACTTTCTTTTAACTATCTCTTTATTTTTTGAAAACATATGTAGACATGCAGTTTATAATGAGTGTCCTTATCATTTTCATTCCAAGTTATTACTTTTCAT ATAGATTTAAGCTAACCAGAGTCAGCCCCGAAGAAAGCTGAGTTCATCATGTGTGACCAAAGGCAGTCTACAATTGTTTTTAATCTTTCATTCACCATAC GATCATTTTTAATTATATGTTTATTTTGGTAATTTACTAACTTTTTTATCAACCATATAGTAGCATAAAGTGTACTCTTTGGGGACAGCTTGCAACACAG TTGGTGAAATATGAGGAAGAACACATGGTGGGTCCAATTGTTGTTGTTCTATTGACTCTTGCCAAGATCAGATAGGCTAAAGGTTTATCATCACTTTACA TTTAATTGAATTTTTTTTTCTCTAATGAAGAAATATAATGTATTGTTCAAAGCTCTACCTAAATGACAGCAACAACCTAGCGTCATTCTCAGCCTTCATT CCCATTACAACCTCACAAGACCTTTCCCTTCTCTTCCTAGAGAATCTCCACTGGCACACCATCACCGTCGTTGGATCTCTTTGTGGAGTCCATCGCACCT TGAGCCACTTCATCTGTGAATCTATCTGTTTGTTATGGGATCTTCTGAACGTAGAGGAGAATGAAACGGAAGGATCAAAGAGGAAGGAAGAGGAATTGAA GGAAGTGGTGAAAGAGTTGGAAGGAGAAGATTTGGTGAGGAAGAGAATGGCAGCGAAGAGAGTGAGGATTATGGTGAAGGAAGAAGAGTTGGAAGTGAGA AGAACGCTTTCAATGCTTGGAGTGATTCCTCTACTTGTTGGAATGCTTGATCATGATAAAGAATGTGTTGACTCTCAGATCGCTTCACTCTACGCGTTAC TCAATCTCGGAATCGGAAATGATGCGAATAAAGCAGCAATTGTTGAAGTTGGTGCTGTTCAGAAGATGCTCAAGCTGATTGAGTTACCAGGGGGTCCAAA TTCACTAGTCTCTGAAGCAATTGTCGCAAATTTCCTCGGATTGAGTGCTTTGGATTCGAACAAACCAATAATTGGGTCCTCAGCTGCAATACCGTTCCTA GTTAGAACCCTTCAGAGTTTAGATGATAAAACTAGCCCCCAAGCTAAGCAAGATGCTCTCAGAGCACTATACAATCTTTCGATCTTTCCAGGCAATGTTT CATGCATTTTGGAAACCAATTTGGTCCATTTTCTGGTAAACTCAATAGGAGATATGGAATTAACGGAGAGAACCCTCTCAATTTTAAGCAACTTGGTATC AACTCGAGAGGGTAGGAAAGCTATTAGTGCGGTGCCGGATGCGTTCCCTATCTTGGTGGATGTGTTGAATTGGACTGATTCACCGAAATGCCAAGAGAAC GTGTCGTACATTTTGATGGTCATGGCGCACAAGTCCTATGGTGACAGGCAGGCCATGATTGAGGCTGGGATCGCTTCATCGTTGCTTGAATTGTCCCTTT TGGGTACCACATTGGCCCAGAAAAGGGCGTCGAGGATATTGGAATGTTTGAGGGTAGACAAAGGGAAGCAGGTTTCCGGGAGCTTCGGTGGAAACTTGGG TGCAAATGTATCAGCTCCTATTTATGGCTCTTTGGCATCTTGCGCAAAAAGAGATGGAGAAGGGGCAGAGTGTTTGGAGGAGGAGGAAGATATGATGAGT GAGGAGAAGAAAGCAGTGAAACAGTTAGTCCAGCAGAGTTTGCAAAACAACATGAGGAAGATTGTAAAACGGGCCAATTTGCCTCAAGATATTGATCCGT CTGATCATTTTAAGTCACTCACTTCAAGTTCAACTTCGAAGAGCCTGCCGTTTTGAAGAATTGCAGTTGCTGAAGAGAGTCGGGATTGAAGAGAATGAAC CATGAAGTTAGTCTTCACACCATAATTTTGTCGAGCTTTTAGGATTCTGTAGTTATTTGCTAGTGCTGATAAAATAGCCATTGCTTGTCATAAACTTAGT ACATAATTATAAAATTACTTGGATTTGGATCATCTCCTGTTTCCGAATAACGGGGTATGGTCTTGATAAAGAAAGAAAGACACACACTTTTTCATGTAAA TAGGGGTTCATTAATTTCATTTCTAAAAAATTGTGTCTTTCCCTTTCCAACAGGACAATGTATCCAAATCCGAAGTATTCTATTCTTAAGTTTCTGTTTT GGTCGCATTCTTTTTGGTTGCTTTGTTTGTTGGTGTGTTCAAGGGGCAATTTTTCCTTTCTGTTGCATCACTATGCATCAACCAACCAAGGAGGTACACT GTTTCAAAAAAACGGATAGCCACAATGACACTATATGTGATCATTGAATGACTCCAATTCAGGGGCATGAAATGAAAAATTGGCCAATCTCGGGGTTGGT TCAGTCAAAAACCCATTACAAGTGTGTCCCTACATTCTAGGAGTCACTTTCAAATCATGGTACACTTATGTCTCCCTATTGGACCCACAACATGTTTATG CTGGAAAGAAGGTGTCGGTCATTTTCTACATGTTTGTAAACAGGGAATAGTCACTGAAGTTTCCTATTTTAGAGAATCTTTCCCATGTTGTTTGGTTTCT CAGAATCTATGGATTATGTATTTGATGTAGTTTGTTCTGGATTAGAATCTTCTCATGTCATTTTTTTAACTCATGTGGATGAAAGAGATAGACACAAAGT TCATGAATGAAATTTCACAACCTAATAAATTTCATTTGTGTCTATCTCTCTTTTCTAGAGCTATCAATTCATGCTGTCCAACCAGGCCTGCCTCGGCTCA ATTCAAGCTTCCCGACTAAGATCTGGTCGGCCTGATTTGGGCTCAGGCCTTGTAAAGAAAGCCCAGGTTATTTGTGCTGAAAACGGTTGCCTAAGCCCAT TAGCAGACCAAGTTTGTAACACCATTGTATGGATTTCTGTGGTCTCGGCGAATCGGCCAATGGTCAAACTGGGTTTGGACTTCGGACCCTATCGAAACGG CCGAAATGACTTTGGCTCTATTCATAAGGGCTTTTAAGTACTTACGCCCTCCCATTTACCGGACAGGTTCAGGCCCATGGGCTGGCTCATTTTTCTACCT CGACTCTCTTCCGAAATGACTTCGGCTCTGTTCTGTTTGATATACATTTGTAATCTAAATGGCATGGAAGGATTAAATACAACATGGATCTGGTTATGGT ATATAAAGTTGATCTATTCTCATAAATAAAGTAATGAAGATCATTTTGTCCTTGTAGGGTAAAGTTACAATAATGCTATCTTCTGCTGTGGTGGTTACTT TAATTTTGTTGACCTTAGTGTAAATATATTCTAGTGTTAATGTGACTTTAGTCTTAAAAAATATTATTAGATAACTCTTCCATAATGTGCCATTTAAGGG TTGATTTTCATTTACTTTTTTTTATTTTGCTTGGATCTGATCTTCAAAAAGAATCTTGCTGTGGAGGACATGATCCTAGTTTTGGTTGGAGCTATAGTGC TGCTAGTTTTGCTTCTATGGAAAGAAAGTTGAGAAGGATAATACCGATAATGGTCCATTTGCGAGTTGAGTATCGGATGAGGAGAAAGGGAAAAGAGAGA CTTCAAAGTCATTTCATAATTGTATTTCATTTTCTTTCCCTCCAAAATCTAACTCGTAAACAGATCGTAAGAGTCAAAATCTATTAAGACCCTCTTAACT CATGTTTTAGGTTTGGATAATATTTTTGTTTTTGATGTAGTCGCTATATTTTCTCATAAGAATAAAACATGTGTAATAGCTTATCAATAAAATTATAAGG TGTAGTAACATGGGTACATGTTTTTTTACTAATGGGAATCAGCACTAGAAGCACCAAAAAATCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_162268; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337212
| Blastp | U-box domain-containing protein 12 from Oryza sativa with 34.55% of identity |
|---|---|
| Blastx | U-box domain-containing protein 7 from Arabidopsis with 30.93% of identity |
| Eggnog | Ubox(ENOG410ZJYS) |
| Kegg | Link to kegg annotations (4339839) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438783.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |