Id Trinity | TRINITY_DN48577_c1_g1_i8 |
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Name Transcript | Ll_transcript_337216 |
Sequence | ATTTTATACCAATTGTCGCTCCAAAAAATTAAACCCCTTAAAATATATTTATAAAAAGAAAAGTAAAACATGTGTCAAAATATTGAATAGGCGTAAGAAT ACAAGTCATGTAAACAGATACTTTATTATTTTCACGATTCTCATGTGGTTGCTTCCGCCTAAAGAGCTCCGTCTCCGCCGCCTCCTTCCGCCGCATCATC TTCCACACAGCGGCAAGTGGATGCGGCCACCGTGAGGCAGGATGACGTGGAGGTCAGTGTTTTGCTTCACTTCCACTCTCTCATTTACTCACTCACATAT CCTTTTCTTATTTCTATTTTCATCTTTTTCTCTGTTAATATAATTATGGAGATTACAGTGATGTTAATTTTAGATATTTTATGTTTTTTAATCTTTTGAT TCATTGTTTTCTGTTTTGCATGTATCTATCGATTATCAAACAACTTTTTTTTTTTGCATGTGGATCTTAAGATATGTCTGCAAGAAACTTAGGTTTTCTG ATTTTTTTTACTATATATCCGTGATTACGGACGTTAATAAAGGGCGGTCTATTGCACGAGACTCTCAGATGAGGTTTGGGGAGGTATGCTGTCATACAGC AAAGAGTGTGTTTCGAGGATTTGAACCTATGAGTTCCGGATAACAAAGGCAAGCAAAATTCATATACTCTGTTTTTTAGGTTGAATTTTTTAATCCGCTA TTATGAAAATTGGTTCTTTTCAGAAAATGCTCAAGCAGATTTTATTATGTGCCAGATTTTACGTAATCATCGGCCACTTATACCACTGCTAGTTAGAGAC CTTCATAATGTTCGATATCCAATTTTGTATTTATCTGTGACCTACTTTGTTGGAAGAAAACAAGGTAGAGAAAGTTTGAGTGAATATAATTTCATCTACA ACTTAGTATGGAGTTAACGTCTATGTGAATTAAACATTAAGATGATGTCGCCTCCAAGAGGCAACTCAATTGGTGGAGTTGTGCGACATAAGGTGTGAGC GAGAACTCGGGTCCCTCGATAGCTGCACAATTTCCCCTCGCCCCCTCCCCGTGAAATTTTTTAAAATGATGTCAATACAACTTACGTGTTACTATTTTAG TAGTTATGGTATGGAGACAGTTTGGGGATAGAAGATTTTCGTAATGGTCTACCAAAATAAATATGGTTATATATAGGGATTGCCTTATTGTTCTACCAAA AAATAGCCACATGTGGGGGCCAACGAAGATACAAGCATACGAAAGAAATTCCAGGTTTTGTTATAGGCTCCATTACTGTGACACGGTGGCGTAAGGAGTA AACTTTTAATAAGAGCTACTGTTCATGCATGGTGTGCATGGCGCGAGAGAAAGTATTGTTGATGGCTTCTCAACATTGTCATTAACAGCCAACTTGGAAT CATCTTCTAGTGTTTAATTTTGGCACCACAGTGAAAGATTAAGATCAACAATTGGACCCTCTGGCTTCTCCTTTCATCGTTTACCAATAGAAATATCTCC AACCATTTGAAATTCTATTTTCTGAAGGCCTGATACATATACTGTCAGATTCAGGAACTACTACATAAACTATTTCCATGTGAACTGCATCTTTGGGATA AGCATTAAGATCAAACGCTAAATTTTTTACGTTTCTCCCTTTTCCGCCTGTTGATTTTGAAATGGAAAAAACTTTCATTGGATGTGGTCTGCTTTGTGCT ACACATTGCTTAACAAGTACCAATGGTGATCGAGTGGGAGCAATAGCAGGTGTAGGGACTAGTTACTTTATTGATAACACCCGGTGCTCTTCTAACGATG AGATTCTATTCTTTCCTTTGTTGAGGTCTGTATACTACCGTTAATGGTATCGGAGGAACTAGGCGCACAATAGATTATTTTATTTGCTAATAAATTTTTA TTTATAAAGTTCTTTAAGGTTCTATTGAAGGATGAAAATTGGGTATTCTTCTCTAGATGTTTCTAGTGTAATTTTCCAATAAGAACATGACATGTATAAG AGCTCATCAATGAAAAGATAACATTTGCTATGTTCTTATTGGTAAAAAGCGCAACTGACACCTAAAGAAAAACACTTCAGTCTTGTCCTTTATTTAGTCA TATCACAATTAGGATATAGGCACCCCTATAGGATGTTTTTTATTCCTGCACTTTATGCTCTATATAAAAATTTCTATTTGCTGGATCCATTGCTTTTATT TTGTCGTTTATCGGTAATTTTCAAATTTTGCTATTATTTAATAGTTGGGTTGCAGTTTCCTTCTTTTCGGCATGTTGAGTTTGAAATGGAAGAAACTTCC GTTGAATGTAGTCTTTTTGATACACGTTGCTCAGCATGTATGGATGGTGATCTGGTGGTACAAATAGCAGGTTTGGAGACTAGTTACTTTATTAATAACA TCTTGTGCTCTTCAAACGGCGAGATGGGTTCTCTTCCTCGTTGAATTTCGCGTACTACTAGACGGAGGAATCATGTGAACAAGGGGAACCATCACTAGCA AAATCTCAGTATCTGGGTGTCAGTTAAACAGTATTTACAACCAGAAAACATCCAGGGGAGGTAAACTCATTTTATTTGCTTTGAAATTGAAATTCTTTTG CACTGCAAGAATCATCTTCAGGAGTCGCTTGTTATCATGAACGACAATATACGAGAATCAAGCCATAGTCAAGCTAAGGTCCATACAGGTGTCTCTGACT TAATGGAAGAGGAGATTAGAGTCTGTGATACTTGCGGGGATGCTGGTTACGAGGACTGCCTTGCTTTTTGTAACAAGTGTAACGATGGGGCTGAGCACAT TTATTGTATGGCTGTGAAGATGGCCGAAGTTCCTAAGGGTCAGTGGACATGTCAAGAGTGCGTGCCGAGGGAAGGTACCGGCAAATTGGTTGAAGTTAAA TTTGACGAGGCTACCAGAAGATCGAAGGAACCTTCATGTGCAAGGAAGAGGACAAATGACCCAAGCTTTACATCTAATCTATCACATGAGACGGATAGAG TCCCTTTAAAATCTCAATCTGAGAGAAAAGGTGCAGATATTGGATCAAGTGAATCTGAACCCTGCAATGACTCCCTTGTTTGCAAGCTCTTACCGTGTGA GAAACTTAAAGGTGCGAAAACTAAATCAGTCAATGATATTGTTCATTCTGGTCTGCGAAGTTCTTGTAATCCTCAAGAGAGAGCAAAGGCAACAGAGGTG AATGACTCAGCAAACACACTACTATTGTCAAAGTCTTTAGAGCCGGAAGATGGAGTTGAATCAGCAAGAGTTGAAGTTACCGAATCTGACAATATATGTA CAAGGTCCTTAGGAAACATGAATTTTGTGATTGGAGAAGGTTCTAAGGGTAAAGGAGTAGAGGAGAAATCAGAGGGTGCAGGTATGGACCAGTTGGACTT GGAAGCTGCAGATATTTTGATACTTCTCAAAGAGGGCAACGAATAGTACCATATCTGAAATTGTGAACAAAAATAGCTCTTATTTATACATTACCCTTTA TATATGATCATAGTTATAGAACCTAGAAAATGGAACTTGGTGCTCTGTTTCATTTTTCTGTATCTGCATTAGCCCCTAAACATGGGCCCTTAACTGTTTT TTAGTTTTGTTTGGGACAACAATAGGGCACTTGACCCTTGCTTTTACTTCTCTAAGTTGTAATTTTCTTGGCTCTTGGTGTTTTTCTTTTGTGGGTCGTT GGTACATGTCATGATATATTGTATGGTTTGGTATTTCAGCGAGTGTTTAGAGAGATAAATAATAGGATCGTATATGTCCCACAATTTGTGTTACTCTATG TGTCATAAGTTGTTATTGGTCAGAAAAATACTTTAAGATAAATATTTTTCAATCAATCATAACTCATGACACATGAAGTGGTACATATTAGAAGATAGAA GATGTGCTCTTTTTGGTGTACACTAACAATTTAAGTGTTTTTTATGTTGTTAACTATTATTTTACTACAAATTGTTAACCATTACTTTGAAACAAAAGTG ATACAAAATâBLAST |
Tissue | pods |
Gene name | LI_gene_162268; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337216
Blastp | Lysine-specific demethylase 5B from Homo with 32.61% of identity |
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Blastx | Lysine-specific demethylase 5B from Homo with 32.61% of identity |
Eggnog | lysine (K)-specific demethylase(ENOG410XR9J) |
Kegg | Link to kegg annotations (10765) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450286.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |