Id Trinity | TRINITY_DN48577_c1_g4_i1 |
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Name Transcript | Ll_transcript_337214 |
Sequence | GTTGAAAGTGTTCTTGGTTTGGCCTTATTGTTGCACATTGAATCTGTACAGAGTTTTGAAAATGGTGGCACTTAGATCATTGTTCCGATCACTCAGCACC AGATCTTTTCGTTTCACTATTCCATCCACCTCTATCATCAACCCTCGAACATTTTTTACCTTTTCTTCTTCCTCCTCTCAAATTTCTGCTTCTCCTAATC GCTTTTCTTCAGGTGCTATCTATTCACCCCTTTTTATATTCCTACGAAAAGTTTTATTTTTATTTATACCCATTTGATTATATATCTCTTTGGAGTAAAT TTATCATTAATCTTTCGTTTTCTTACTGGTAGATTGGTTTTTTTGTTATGATGTTGATGTGTAATTACATAATTGAATTTATATTTCCGAGTAGATTTGT ATCGGCGTAGTTTGCCTAGATTCAGTGTGAAACATAATTTATTAACTCATAAAAGCGACCCGATATATGAGGCTCCAACCTAATGGGTTTGGAGAGGGGT AGATGTAAGAAACATTGCATTTGCAAGGAAATAGAGTAATATACTGTTTTCGGGAATTCAATCGGCCTACATGTCATAAGGCGAACAATCTTACCATCTC ACCTCTGTAATTTATAAACTAATCGGGCAGTAAATTTCGTATTAAGCTAGAATCAAAATTTCAGAATATAGAAGTTGGTTGGAAAATAGAGGCAGATGTA AACCGTAAGATTTAAGCGAGGCGGATAAAACGAGTGATTCTGGTGTTGTTATTTGTGATAGAAAAGTACAAATGAAATTGGTTGGAAAATAGGAGAGGTA AACCATAGGATTCAAGTGACGGGGATGAGAGTGAATGTTGGGCAATAAAAAACCCAAAAAGAGATTAAGTTCAAGGTAGCGGGGATGAGAGTGTTGTTAG ATTAGTTGACGCATTAAACAATATATGATTATGAATGAATGTATTAGAAAACAATTTGAGGTAGCAGCATATTGTAGAAAAGACTGTACAATCTCTCCTT ATTTCATGTTATTACTCATAAGCATGTGGTAAACAACTATGTGTTGTGATGTATGATTCTTGTCATGTTTGGGCAAACAGTTTAATTGAACGTTTATAAA ATATCCTTTTTTGAAATAAGATTCTCTTGTAAGGACATTAAGCTAAAAAGAGCTTATAGCAATGCCATAAGTTATTTTCATGAGCTGTTTTTGTGGGCCA GATAATCATTTTCGTGGTTTTTGTGGGCCAGACTATAATGAATTTGGAAGGCCAGATCACCACAGTATTTTGCATGTGTTGATTAGAAAAACAAAGTTTA TACGTTTTCATTCTAGATATGCTTCATAATTTGGTGAGGCATTGGACTTCATTGATTTCTCTAGCATTCTGTTTGGTATTATAATTGAAAAATGGATATT GACTTAGTATTGCTTGAAAACATGCACAGAATGCAGGTCTCCTCTCTCAATAGGCTTAGGAAGCATGCGATCTTATAGTCAAGATGTGGCCCACAACCCT GACATTAAAGACCTTCAGCTTCTAAATGCTTTCAAGGATTTGATAGCTGAAAGTTGGGATGAGCTTCCAGAATCTGTTGTTTATGATGTTAAGGAAGCTT TATCAAAAAATACCGACGACAAAACTGGCAAGGACGTTGTGACCAATGTGTTCAGGGCAGCTTTAGCTGTTGAGGAGTTTAGTGGGATTATAACTTCGTT AAGAATGGCAATTGATGACAGCGTTGGAATGAGTGGCGAGGATGTAAAGCCTTTGCCTGATCATATGAAAAATGCTATCCGGACCATTTTCGATCGCTAT GGCACCTATTTGAGTTCCTTTGGGCCTGATGAGACCTATTTGCGGAAGAAGGTGGAGACAGAATTGGGCACAAAGCTGATACACTTAAAAATGAGGTGCA GTGGCCTTGGTGCTGAGTGGGGAAAGGTTACGGTTCTCGGAACTTCTGGACTCGCAGGTTCATACCTTGAGCAAAGAGCATAGAAAGAAATATTTTAGAA ACAGTGAATGTAATTGTTTGTTTGTGTTTTTACATCATGCTTTTGATGCCTTTAGACCCACAATAATTTTACTGCTGACTTTTTTTTTTGTCAAGTGTTT GATGGCATTGAAATAAGAGTGCTTAACTTTGTTAACTGGGATATTCCCCTTACAGTGCTTTCTTAAATTTCTGCTTTTCATTTTCATTTCTTCCATAAGG TAACGACCCTGGTCAAGTTCTTAAGTTCTTGTAGGTATATATTTTCTTGACAACATGAAAGTAACAAGTCAAGAAGCTAAATATTAGATAAAAGAATGCA TGTATTGACAATGTACAAGTTTTATACATTATCACTGTATCAACTACCATTTATACATTGTTTATTCAAAAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_162271; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337214
Blastp | Succinate dehydrogenase subunit 5, mitochondrial from Arabidopsis with 66.86% of identity |
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Blastx | Succinate dehydrogenase subunit 5, mitochondrial from Arabidopsis with 65.56% of identity |
Eggnog | NA(ENOG4111Y8T) |
Kegg | Link to kegg annotations (AT1G47420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443140.1) |
Pfam | Domain of unknown function (DUF4370) (PF14290.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |