Ll_transcript_337222

• Id Trinity: TRINITY_DN48577_c1_g4_i2
• Name Transcript: Ll_transcript_337222
• Sequence: GTTGAAAGTGTTCTTGGTTTGGCCTTATTGTTGCACATTGAATCTGTACAGAGTTTTGAAAATGGTGGCACTTAGATCATTGTTCCGATCACTCAGCACC AGATCTTTTCGTTTCACTATTCCATCCACCTCTATCATCAACCCTCGAACATTTTTTACCTTTTCTTCTTCCTCCTCTCAAATTTCTGCTTCTCCTAATC GCTTTTCTTCAGAATGCAGGTCTCCTCTCTCAATAGGCTTAGGAAGCATGCGATCTTATAGTCAAGATGTGGCCCACAACCCTGACATTAAAGACCTTCA GCTTCTAAATGCTTTCAAGGATTTGATAGCTGAAAGTTGGGATGAGCTTCCAGAATCTGTTGTTTATGATGTTAAGGAAGCTTTATCAAAAAATACCGAC GACAAAACTGGCAAGGACGTTGTGACCAATGTGTTCAGGGCAGCTTTAGCTGTTGAGGAGTTTAGTGGGATTATAACTTCGTTAAGAATGGCAATTGATG ACAGCGTTGGAATGAGTGGCGAGGATGTAAAGCCTTTGCCTGATCATATGAAAAATGCTATCCGGACCATTTTCGATCGCTATGGCACCTATTTGAGTTC CTTTGGGCCTGATGAGACCTATTTGCGGAAGAAGGTGGAGACAGAATTGGGCACAAAGCTGATACACTTAAAAATGAGGTGCAGTGGCCTTGGTGCTGAG TGGGGAAAGGTTACGGTTCTCGGAACTTCTGGACTCGCAGGTTCATACCTTGAGCAAAGAGCATAGAAAGAAATATTTTAGAAACAGTGAATGTAATTGT TTGTTTGTGTTTTTACATCATGCTTTTGATGCCTTTAGACCCACAATAATTTTACTGCTGACTTTTTTTTTTGTCAAGTGTTTGATGGCATTGAAATAAG AGTGCTTAACTTTGTTAACTGGGATATTCCCCTTACAGTGCTTTCTTAAATTTCTGCTTTTCATTTTCATTTCTTCCATAAGGTAACGACCCTGGTCAAG TTCTTAAGTTCTTGTAGGTATATATTTTCTTGACAACATGAAAGTAACAAGTCAAGAAGCTAAATATTAGATAAAAGAATGCATGTATTGACAATGTACA AGTTTTATACATTATCACTGTATCAACTACCATTTATACATTGTTTATTCAAAAAAG
• Tissue: pods
• Gene name: LI_gene_162271;
• Additional information: details;

Expression of Ll_transcript_337222

FPKM

• PAB: 44.3
• PNAB: 40.8
• PS1: 35.9
• PS2: 30.6
• PS3: 37
• PW1: 34.8
• PW2: 40.6
• PW3: 31.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337222

• Blastp: Succinate dehydrogenase subunit 5, mitochondrial from Arabidopsis with 55.46% of identity
• Blastx: Succinate dehydrogenase subunit 5, mitochondrial from Arabidopsis with 63.98% of identity
• Eggnog: NA(ENOG4111Y8T)
• Kegg: Link to kegg annotations (AT1G47420)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443140.1)
• Pfam: Domain of unknown function (DUF4370) (PF14290.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;