| Id Trinity | TRINITY_DN48579_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_337713 |
| Sequence | AGAAAAACTTGTATGGAGACGCATGTAACATGTCACATTTAGAGACACATATATTTGATAGTTTTTGGTGCTATCATTTAAGACTAAATTTAATTAGAAT TGAAATATTAACTTATTGTCAACATCTTATTGGTTGTCTTTCGTCTCCGCAGAAGTCTCTACTAATCCTCCGGCATTGACACAAGGAAGATGCAGTAAGT TGGATCTATAACACCAGCAGGTAATCATTACTGTCTTCACTCTTCTTCCTTCTTCCTTCTTCCTTCTTCGTTCCCTCTCGATCTTGAAACAATGTCTTCC ATTAGATTAGAGGCAAAGCAACAATACACCACACCCGTTCTGGTGCTTGGTTACGCACTCTGTTCAAGCCTATTATCCATCATCAACAAATACGCTATCA CTCAATTCAACTACCCTGGTCTCTTAACCGCACTGCAATACCTAACTTCTGCTCTCGGCGTTTACCTTTTAGGGAAATTAGGGTTTCTTCAACATGACCC TTTCACTTTCGCCACCGCCAAGAAATTCTTCCCCGCCGCACTTGTTTTCTACCTCGCTATCTTCACCAACACCAACCTTCTCCGTCACGCTAACGTTGAC ACCTTCATTGTCTTCAGATCGCTAACACCCCTTCTTGTTGCTATTGCTGACACCGTTTTCCGAAGCCAACCTGTTCCGTCTAAATTTACGTTTTTCTCCC TCGTTGTTATTCTCAGTGGTGCTGCGGGTTATGTTGCCACTGATTCGGCTTTTACTCTAACTGCTTATTCTTGGGCTTTTGCTTATTTGGTTACTATTAC AACTGAGATGGTTTATATCAAACACATGGTCATGAATCTTGGTTTGAACACTTGGGGTTTTGTTTTTTATAACAATTTGTTGTCTCTTATGATGGCTCCT TTCTTTTGGTTTTTAACTGGTGAGAATTTTGAGGTTGTTGATGCTCTTAGATCGAGTTCCGGGAATTTATTTCATTTGAGTGCATTTGTTGCTGTGTCAT TGTCATGTGTGTTTGGGTTGCTTATTAGTTTCTTTGGGTTTGCGGCGAGAAAAGCTGTGTCCGCTACGGCGTTTACTGTGACCGGTGTGGTGAATAAGTT TCTTACTGTGGCTATCAATGTGAGTATTTGGGATAAGCATGCTAGCCCTGTGGGGTTAGTTTGTTTGCTTTTTACCATTGTTGGGGGAGTGCTCTATCAA CAATCGGTTACCGGTCCTGCTAATGTTCCTCCACCGCAGCAGCGTGAAGCTATCCCGTTAGTGTCTAAGCAGGGGGATATTGAAAATGACATTGATGATA ATTTGACAGGTGAGAAATCAAGGAAAGGGTAAATTTGCTTCTCTATGTGTCTTTGTACCAAGGTTCTAAATTGCAGTTGAGGTTATGTTGTGTGGATCGC CATTGTCTGATGTGGTTTATGCAGCCATAATTGTGGCCGTCGTGTCGCTGTGGAGCTGCCAAACCACAATTTTGCGTATTGCAATTTAGAACCTTGATTT GTACTATTTATTTATTATAGTGAGCACTTTGTGTTTAAGGTGTATAATTGCTGGCTTATGAATATGCCAGCAGTCTCAGGATTTTTTTACGCAATAGGAG GTATTCTTTTCAGAAGGGCGTAAAATTGAGATGTTGCTCACTTCTTTGCTCACAAAATTTCAGTTATTATTCTTGTTTTTCCTGATATGGTTATTTGCCT AATCCCAGACTTCATTACAACAATCATTTAAATGCAGTTATTTGTTTTTCTGAGTGTGTTGTTTAGATGGTAAGGCTATTAGGTTGTTTCAAAATCAATG TTCAGGTGTTTTCTAAAGAAAAATAAACTCATAAGTTCTCCCATCATTTTTCATGACCGGTAATTGTGTCATGCAAGCCTTAAATTTTCTGTCGAACATG TTTGTCATCCTGTAGTTTGTCACTGATGTCTGGTGGGCGATTTAGCAATATATTGCGATTTGATTCACAGAAGTTGCTGCATTGCTTAGCAGCTTAGCCA TAAGTAGGTGGTCTTCCTCTTCTGTTAAATCAAAACAGTAAAACACAATTGTAGCCCCCTCATAACCCTGTCAAACTAATCCATAGTGAAAATGGCATAT ATAGTGTAAATTGTTGTCCCCATAGCGCAGTAACATGCCCGTTTTAGGGACTTATATGGCATATATATTGTAATTTTTTGCTGTTTTTCACCAGCAGCCA ATGCCAATATATCTGGTTGTTGCCTCTGCTGAGTTAACCATTGAAGTTACTACCTGCATCTGAAATTGCTCTCAGATGATAATGTGCTTTATTATTTTCG TAACTCATAATCATTCCTTCATCTTGGTAGAAATATCAACTCTGATTTGAGCCCTGTTAACTAATATTGCCTCGGTTGATGGATTTGTAGTTGAACTGCA CGTTGAGGAGGGTAAGGGGAAAAAAGAACAGGCAGATGTGGAAGTTGTGGAGGCATGAACGTAAGGCTGTGAATTGTTACTATATACACACCAAATTCAT TCATTAGGATGAACAAATCAGAACTTGAGTAGAGGACTATACATTAGCTCGCTGTAGTATAAAAGCTGATATGAAAATAATTCCAGATTCTTTGTAAACA GACATTTTACATGAAAAATCTCTTCAGTTAGTGCTTCTACATGGACCATATGACTTGAAAAAAAAGGTATTAGCTTAAGTTCTGTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_162280; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337713
| Blastp | GDP-fucose transporter 1 from Arabidopsis with 72.57% of identity |
|---|---|
| Blastx | GDP-fucose transporter 1 from Arabidopsis with 72.57% of identity |
| Eggnog | NA(ENOG410XP3X) |
| Kegg | Link to kegg annotations (AT5G19980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439660.1) |
| Pfam | Triose-phosphate Transporter family (PF03151.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |