Ll_transcript_336495

• Id Trinity: TRINITY_DN48580_c0_g1_i11
• Name Transcript: Ll_transcript_336495
• Sequence: CAACAACAACAACTACATAACATCTCCTTCTTTGCATTGCATAATTTGGTCTTTGGTATTTTTAGGTGATGAAATGACCAGGATCATTTGGAAGATGATA AAGGATAAACTTATATTTCCGTACCTGGATTTAAACATAAAGTATTTTGATTTGGGGGTCGAGAATCGCGACGCTACCGATGACAGAGTTACTGTCGAAA GTGCTGAAGCCACTCTCAAGTACAACGTTGCTGTGAAATGTGCAACAATAACTCCTGATGAGACCCGAGTCAAAGAATTTGGATTGAAGTCTATGTGGAG AAGCCCCAATGGGACAATCAGGAATATTTTAAATGGTACTGTTTTCCGTGAACCCATAATATGCCGCAACATACCCAGAATTGTTCCTGGGTGGAAAAAA CCCATATGTATTGGCAGACATGCTTTTGGTGATCAGTATCGTGCCACTGATGCAATAATTAAAGGACCAGGGAAGCTGAAGTTGGTATTTGTCCCAGAAA ATGGTGATGCTCCAACGGAGTTTGATGTTTATGATTTCAAAGGCCCAGGTGTAGCGCTTGCTATGTATAATATTGATGAGTCTATTCGAGCTTTTGCGGA ATCATCAATGTCATTAGCATTTGCAAAGAAATGGCCACTTTACTTGAGCACCAAAAACACAATTCTCAAGAAATATGATGGCAGATTTAAAGACATATTC CAGGAGGTGTATGAAGAAAGGTGGAGGGAAAACTTTGAAGAACACTCAATATGGTATGAGCATAGGCTAATTGATGACATGGTGGCATATGCGGTCAAGA GTGAAGGTGGATATGTTTGGGCTTGCAAGAATTATGACGGTGATGTTCAAAGTGATTTACTAGCTCAAGGTGATATAGAGAACTTATCATATATGCCCAA AATGGAACTATGATTGTATGTATTGATATTAATATATATGTTATATATATAACGTCAACAAGCAGTACTTGGTTGATTAACCAGCGACCTTGCATAACAA TTCTGATTAGATCCATGAAAAATGCTAGCAAAACTGTCTTGAGCTCAGTTCTCGTTATTGGGTTAATTTGATGTGGGATTCACTAAATCACACAGGTTAA CTCTCTATTCAACGGGCCTACGTGAAATCTGATCAATAATATAGGGAAAAGTGTGTTAAAGAATATGTAGCTAGCATTGCTCTAAGATCCATTGTTCGAT CCAAACTGTGAAAAGTGGTTGGATTTTTACCCATACAAAAAGGTATATGTATTATGAATCTGACCTGGCTCAATTAGTATGTAAATCCGGATGTCTAGAA CTGGGATCGTTCGGACTTTGTGATCTTTGTTTATTTGCTTTGAGTGGCTTATAATTATTGCTAGCTAATATTATCAAATAAATTAACTGATAACAAAGGC TTATGAAAATTTACCCATATTACAGGTTTCCTGAACATTTATAAAAATACAAAGAAGAAAATGGCATTGCAGAAGATTTGAGATGAGAATAAGTTGTTTT GTAAACAAGGAACACCTCTGGCTTTTCATTTAGTAGGTCTATATTTGTGCATAACAGGAAATCGTTTTTTGTGTCTTCATAGCTAAACAACAATATGATG AATGGGGAGAGAGTAGCTAAGAAAGAGATGAATTCATTATTTTTTGCTGATTATTTGTTACTTAAATCTTGAAATTCTCACGTCATAACCATGATAGTAT ATGTCTGTTATGTGTGGTTGTTAATTTTATTTTTCTATTCTGAATGTACTTAAGAAATGGGAAAGAGAGCTTTGCGAACTTTGATGTCATGAATAATTCT GAGATGCTTGAAATTATCTTTCAAATTAAGTTTCTTGAAGTCTATTTTTGTGTGCAGGATTTGGCTCATTGGGTCTCATGACCTCTGTACTGGTATGTAT TAGTATATCATCATTAGTATGCCTATTTTGGTTATTGGATGTCAAACTTTATTTACAACCACTATTTTGTAGTTATCTTCTGATGGTAAGACATTAGAAG CTGAGGCAGCTCATGGAAC
• Tissue: pods
• Gene name: LI_gene_162291;
• Additional information: details;

Expression of Ll_transcript_336495

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.3
• PS2: 0.4
• PS3: 0.5
• PW1: 0.1
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_336495

• Blastp: Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial from Arabidopsis with 87.73% of identity
• Blastx: Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial from Arabidopsis with 87.73% of identity
• Eggnog: isocitrate dehydrogenase (NADp)(COG0538)
• Kegg: Link to kegg annotations (AT5G14590)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452870.1)
• Pfam: Isocitrate/isopropylmalate dehydrogenase (PF00180.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;