Ll_transcript_336484

• Id Trinity: TRINITY_DN48580_c0_g1_i2
• Name Transcript: Ll_transcript_336484
• Sequence: GTTGTATTCGGGAATGGAATATCTGAGTTCCTTTTTCTTCTTCTTTCTTCTTCTTCTCTCTCTCTCTCTCTCTATCACCTTGTATCGGAGTAGCTGTGTT GTGTTTGGTGTGATGATGTAATTGACGACCAGGATCCCTCAACGGACTCGCCACTTTCCTTTGCCGTCATTCATTATTCACTTTCTGTGTCACAACTCAA CAACACCTATAATCTTTTTCTTTTTAATTATTTTTTTTATATTTCTTAACTTTGTTTTTAATACTATACAATTATTACCTCATATTATATTCATCCATCC ACCTACACGATACTAATAATTCATCCAACTTTTTATATTACAGAGAGAGAGATAGAAAATGTTTAAAAAGTAATAATAATAAAAATCAGAACAAGTAAAG GTTAAGGAAGAAGTAAATATCTATATTTGAATGAGTGAATGAGTAGGTGTTGTGATTGGCAGTGGATAGGTAATAATAAGGATGCAACACTCTCTCTCAC TTCTTCATCTTCTTCCTCATCATCCTCATCTTCATCATCGTCTTCATCATCATCCTCATCTTCATCATCATCCTCTTCATCCCTCGCTTCATTCATTTCC CTCAACCACCACCGCTACCACCACATCCCCACTACCTTTGAACTCTTCTCCAAAGTGGATCAAAATTAAATGTCAAAATGGAGAGTTGACACAAAACAAC AACACCTCTGTTGGTCCTGGAGATGCAGTAATCATTGTAGATCATGGCTCGCGTCGCCAACAATCCAATCTCATGCTTAATGAATTTGTCCACATGTTTA AACATCAGACTGCCTACCACATTGTGGAGCCTGCTCATATGGAATTAGCAGAACCATCAATAGCAGATGCTTTTGGATCTTGTGTTCAACAAGGTGCACA CCGCATTATTGTCACTCCATTTTTCCTCCTTCCCGGAAGGCATTGGTCTCAGGATATTCCTTCCTTGACTGCACAGGCAGCTAAGGACCACCCCGGTGTG TCATATATTGTAACTGCACCCCTTGGACTCCATCACCTACTTGTGGATGTGATGGACGATAGGATCAAGCATTGCTTAAACCATGCAGCTGGAGATGCAG ATGAGTGTTCAGTTTGTGCTGGGACTGGAAAATGCAGGCTCTATTAATATATCAACACAAAAGGAACTTAATTTAAGTTCACCTCACCTAGTGGAAAAGG CCTTGGTTATTGTTATTCTTATTGCCTCTTTCAATTTTTATTCATTGCTCTATCCTCATGGCATCTCAGTGTTCAGTGCTAACACCCTTCTAACATAGTT TCCCCTTTCTCTTATTTGAGTGCTTCATCTTTCCTGCTAATGAAAATGGATCTCATCATTTTTTTGGTTTCTTTCCTTTAACATTTTTTACTCGAATTCG GAACAAGGTCCAACAGAAAAATGTAAATGAAAGTTGTAAAACTACTTGTGTTTCCTTGTCTGTAACTGGAACAACAGATTTGTCCCATTACTCTATGACA CTAGTAAGTGCCTTTCTTGTTGTCATATCAGTTGTAGTCATAGCATTTTACATATACTTGAGCCTGATCCTATACTTGAAACATTTTTGTATGTGGATGC CATTGAAGAAAATCAAATCCTTTATTGATCTCCTCAACACTAATTTAACAACCATATGTCAACCAAAGTAGTTGTTCTTAATCTTATTCTTAATGAAATA GGAAAATTCTTACTCTATTTTCCACATTTAAAGAGAGAGGTAGATATTGTGCGAAAAATATGAATATTGTATAACCCAAATAAGAATAATGATTAGGAAT GTCAACATGGAGTGTATTCTGAAATTCCTGATATACTGCTCCATAGTTCATAGTTCAATATAAAGACAAAGCTGGAAAATTAAAAATGATCTTGGCATTA CAAGTGGTCAGATCTTACAAAGGTAAATAACTGAATAATAAAAATCCTAGAAGATATTTTGAAGGGAGTTTTACTTCTCCGCATAGTCATTCATCCAACT AGGCTTGTGTAACTTCCTTTTGGGCCTTTCATTTGGTTGGGCTCTATCATGTATATACCCAAACTTGAACCTAGAATTTAAAATTCGAACCCAAATTTGA ACTCGGACTCAATGAGGTTGAAAATAAAAATATCATCATCGAACCCGTCGAGTTTCGGATAACCCGAACCCAAAAAACTAGAAAAAATGAATGTACTAAG AAGAGTATGATATCATTTTTGTTGCATTTTCTCTAACATTTCTATTTTTTCTTGAATTATTTATTTTCTTTTATGCTTGAAGAGTTAATATTATGTAAAC TAAAATTATGAATTAAAAACAATGGACACATATTTCAACTTTATATTGAATTATATTTATTCGGGGCGAATTTAGGTTGGGGTATTTGCTCTACCAAACC CGAACTTGAACGCAAAAATTAAACTCGGATAAAACCCGAATTCAATTACATCAAGTTTTCCTTATTAAATTCGGATTCAATTCATGCTGATACACGACGA GTTTTCATTGAAATCCCAAATGATGTTTTCCAATTTTCAATTGAAATACCTAAATTTTGGCTAAGAAATGGGATATTCTTTTAAATTAAGAATGTAGGAC AGGAGGACAAAAAATAAGTTATTTTGAAAAAAAAGTAAAGAATTTAAAATAAAATAAAAACAAATTGTTGGAATAAAAATAAAAGATACAAGAAAAACCG AAAAAGTACATTGTTGTGCTCCACTCCCAAGTCCCAAGTCCCAAGCAAAGTGAAAGCAATTAAGTTGTGATGATAAGAGCCGCTTTTCGATCAAGTGCCA TCTCCGGCGGCGCAACCACCACCAGCACCACCACCATGTTTCATTCTTGTTCAACCTTTGTGAATAAAAACCCTTCTTTCCTCTTTACTTCTTCAACAAC TCCATCATCCTTCAAACACAACCTTCTTTCTTTCTCCACTTCTCCCTTTCATCGGGTTTCTCTTCGCTGCTATGCAACCCACCCTAACTTCCATAGGCTT CAAGTCCTTAATCCAATTGTCGAAATGGACGGTGATGAAATGACCAGGATTATATGGAAGATGATAAAGGATAAACTTATATTTCCGTACCTGGATTTAA ACATAAAGTATTTTGATTTGGGGGTTGAGAACCGCGATGCTACCGATGATAGAGTTACTGTCGAAAGTGCTGAAGCCACTCTCAAGTACAACGTTGCTGT GAAATGTGCAACAATAACTCCTGATGAGACCCGAGTCAAAGAATTTGGATTGAAGTCTATGTGGAGAAGCCCCAATGGGACAATCAGGAATATTTTAAAT GGTACTGTTTTCCGTGAACCCATAATATGTCGCAACATTCCCAGACTTGTTCCTGGGTGGAAAAAGCCAATATGTATTGGTAGGCATGCTTTTGGTGATC AGTATCGTGCCACTGATGCAATAATTAAAGGACCGGGGAAGCTTAAGTTGGTATTCGTCCCGGAAGATGGTGATACTCCAACTGAGCTTGATGTTTACAA TTTCAAAGGCCCAGGTGTAGCGCTTGCTATGTATAATATTGACGAGGTTAGTTTCATTTTATATTTTGTGTGAATATGACATTATGTTTTAATTAAATAT TGAAACACCTGCTTTTGTTATTAAGGACTTGTTTATTTAAACACTTAGCTTTCTTAACGTACCAGTCTATTAGAGCTTTTGCTGAATCATCAATGACACT GGCATTTGCAAAGAAATGGCCACTGTACTTGAGCACCAAAAACACAATTCTCAAGAAATATGATGGCAGATTTAAAGACATATTCCAGGAGGTGTATGAA GAAAGGTGGAAGCAAAAGTTTGAAGAACACTCAATATGGTATGAGCATAGGCTAATTGATGACATGGTGGCATATGCGGTCAAGAGTGAAGGTGGATATG TTTGGGCTTGCAAGAATTATGATGGTGATGTTCAAAGTGATTTACTCGCTCAAGGATTTGGCTCCTTGGGTCTCATGACTTCTGTGCTGTTATCTTCTGA TGGCAAGACATTAGAAGCTGAGGCAGCTCATGGAACTGTAACCCGACATTTCCGGCTTCATCAAAAGGGGCAGGAAACTAGTACAAACAGTATTGCTTCC ATATTTGCATGGACACGAGGACTGGAACATAGGGCCAAGCTGGATAATAATGAAAAACTAAGGGATTTCACACATAAGTTGGAGGCTGCATGTGTTGAGA CAGTGGAGTCTGGAAAGATGACCAAAGATCTTGCACTTCTCATTCACGGACCTAAGGTATCAAGGGAATATTACTTGAACACTGAGGAATTTATTGATGC TGTGGCTCATAATCTGAAGGGAAAGCTCCAAGAGACTCCTGCATTGGTCTCTGAGTAGTAGCTTTTTAAAAGGTTGACACTGGTTTTGATAGATGCCCCT ATTATTTAACCATTGATAGTGATGCTATTTTGGGATGGTGTAAAATAGTTTTGTTGTGAAGAAAATATAGTTGGGGCAAAATGAATTTGTTTTTGATGAA CTGTAACATGGATATATGCAACAATGGCATTAACAATAAGCATGTTAACAAATACCTAGTAGCGCTCAAGCAAATTGAACAGAATTGGTGCATGTTTAGA GATCTGAAGTCCATTATAACCCATGTCTAGTCACATTCAGAGCTTGACTGTTGCAAACTTCCATGGCTTTTGTCTTACCCTTATGAGGTTGCTTTTC
• Tissue: pods
• Gene name: LI_gene_162291;
• Additional information: details;

Expression of Ll_transcript_336484

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0
• PS2: 0.2
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_336484

• Blastp: Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial from Arabidopsis with 87.96% of identity
• Blastx: Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial from Arabidopsis with 88.05% of identity
• Eggnog: isocitrate dehydrogenase (NADp)(COG0538)
• Kegg: Link to kegg annotations (AT5G14590)
• CantataDB: Link to cantataDB annotations (CNT0002000)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452870.1)
• Pfam: Isocitrate/isopropylmalate dehydrogenase (PF00180.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;