Ll_transcript_337973

• Id Trinity: TRINITY_DN48581_c1_g1_i1
• Name Transcript: Ll_transcript_337973
• Sequence: CGATTATTCAGAAATCCAATGGTTTAGAATTATTCACTAATTCAAACCATTAGATTTTCTAAGAATAGATGCCTTCATACCTAAGATGTAGATTAAGTTT TTTTCCATTTACTCTTGGAGCAAGTGGATTCCTTCCCCGTCACAAATTGAGAATAACCCTAAAGCATGAGGGTTTTGGGAAAGAGATCACATGTCTCAAT GATGTCTCACACCCTATCCGAACCTAATCAGAGTGTTACTCTTTATTTTTTAAATTTATCTTTTATCTACATGTCAATATACGATTGAGTTGGGACAGAG TATGAGACACCTATGTATAGGTGATCTCCATCTCAGGCTTTGGTGCTGGGTTCCTTTCTGGGCTTAGATGGGGGACCCAACTTTCTTAACTTTCAATTCG AAGGAGCAAAACCTTTGGAATACTTCGTTGTGTTTGCTGGGTCATCAACTTCCTAGTGGAGTTTGAGTATGACATTGTACCTGTTCCTATTTGTTCCTAT CTTTAATCTTTAACTAGGAACCTACTCCACACTAAACATTTAGTGCATCCATGTAGGGTTTCGGATTTTTTATCATTATATGTACACATTATTGGTGATG TCCAGCTTTTCCTTCCTTCTGAGTGACTCACTCTGTGGTACTAGATACATATATAATTCATATATGCAAGGACACATAGCCTGTACCTAATTCTTGTCCC TGGTCAATCTGTTTTGAACAACTAATATAGAAATATAATATTTTGTTTTTACAAAAGTTATTTTTACTTATGTGGTAATTTTTAATTAGTGGAGACCGAG AATTGGGACAGACTTCGGGACAGGTGATCTCACTCCTCCTAATGTTATACTTTGAAGCTAACTAATTAAACTATGTGTGATTTTTTCATGCTTATTTTTA TTGGTTTAGCGTAGCACATGATAAATTAGGACAATAATTTGTCTAGGATTGCCACCATCCTCCAAACCTACAGGTTCGTGCTTTTTTTTGACATGAGCCA TTTTGGTTTAGAAAATAAGGGTCTTTCTTTGGATGGCCATGCCACGAGTGATTTTTGCTAGCAATGTGGAAGTTGGTTTATTATACAAAGTGTCACGTGA ATACTTAATACCATAAAGATGATATTCCAAAAAAGAAAGGTAAGTAGACGTGACAAAGTTTCTTTTCAAGAATGTTTGGTTTGTACACGAAACTATGAGG TGAAGAACACGAGTCATTTTATCTTGTATATGTCACGCCACCTACTCCCATGGATTCAATAGTCAATACCCAAAGTTAAATTAGAGAGGATAAAACCAGC CTTCGATGTTACCTTGTAGCATTAAGCCAAAAGAATAGGAGAAAGAAAAAAGCCATCATGCATATAATATAATAATAATGTAAGGGTCATTATCACTTTC AACATTATAATAGTGGGAGGGTAGTTAATAAAACAAGACGTATCATTGTCTTCTTGTCCTACACCTAAGATAAAGAACAAAGTTTGACGAGTTAATTAAA TTTTTTTGGCACACCCAAAACACCATGCATCGAAAGATGATGCAATATTGAAACCGAACTTGTTGAATTAATTATTCTGTTACCTCTAATGATGAGAGTA GAATAATAAAGTGCTTAATTTCCCGAAATAAAACGAAGGTAAAGACACATTCGAAACAAAAACGGAAGAGCCATAGAAGATAAGACCCAAAAGTACTTTT TATATTTCTGGGCTACAAAGTCATAAACCTTTCTGTCTCTTTTTATTATCTCTCATAAAATCTGATACTGAAAAGTGATTTTTCTCTCTCCCGAAACAGA ATCTCTTTCTGTTCTGACAATCTGCCCAAACTTTCCTTGTCTTTCCCTCTCAGTTTTGTCCATTTTCGCTCATAAGTTTCCTCCAAACCTTTCGATTCTC TCTTAAAACGTTTTCTTGCTCCTCATTCCTCATCGGTCATGCTCCAAAGCTTGGTCCCTCGTCACTCTCTCTCTTCAAACCCTATCGTTATTTCTTCCAT GTCGACCAAGCGCGCCAACCGCGACGGCGCTGATTCCGCCGCCGAAGGGCCTTCCTTCAAGAGACAGAACTCCGGGAGGAATTTCCCCGGCGATAAGACG GTGGAGTCTGGCGAGGGACACGAGGAGGAACAAACCTTCGAACCAGAACCTGAATCCCATGGCGAATCAACTGGTCTCAAACTCTTAGGGCTTTTACTCC AATGTGCTGAGTGCGTCGCCATGGATAACCTTGACTTCGCCAACGACCTCTTACCGGAGATCGCAGAGCTCTCATCGCCGTACGGTACTTCGCCGGAGCG TGTCGCGGCTTACTTCGCCCAGGCGCTGCAAGCACGCGTTGTGAGTTCTTGCCTCGGGACGTACACGCCACTGTTGACCAAATCGGTAATCCTAACTCAG TCGCAGCGAATCTTCAACGCGTTCCAATCCTACAACTCGGTTTCACCGTTAGTGAAGTTCTCTCACTTCACTGCGAACCAAGCCATATTCCAAGCCTTAG AAGGCGAAGATTGCGTCCACATCATCGATCTCGATATCATGCAGGGACTTCAATGGCCAGGATTGTTCCACATCCTCGCATCGCGTTCCAAGAAGATTCG CTCAATGAGGATCACCGGTTTCGGATCCTCATCGGAGCTGTTAGAATCCACAGGGAGAAGACTCGCCGATTTCGCGAGTTCACTCGGTTTACCGTTCGAG TTTCAGCCAGTCGAGGGTAAAATCGGAAGCGTAACGGAACTGAGTCAACTCGGCGTGAGGCCTCACGAAGCAACCGTGGTTCACTGGATGCACCATTGCC TTTACGATATAACAGGGAGCGATTTAGGAACGTTGAGATTGCTGACTCAGCTGAGGCCAAAACTGATCACAACCGTTGAACAAGATCTGAGCCACGCTGG GAGCTTCCTCGCGCGGTTCGTAGAAGCTTTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGGGATGGATTAGGTGCGGACAGCATAGAGAGGCATACG GTGGAGCATCAGTTACTGGGTTGTGAGATTAGAAACATCGTGGCGGTTGGTGGGCCCAAGAGAAGTGGGGAAGTTAAGGTTGGAAGATGGGGTGATGAAT TGAGACGGGTCGGGTTTCGACCCGTCTCGCTTCGGGGCAACCCGGCTTCCCAAGCAAGTTTGTTGCTTGGGATGTTCCCTTGGAGAGGGTATACCCTTGT GGAGGAAAATGGTTCTCTCAAGCTTGGGTGGAAGGATTTGTCTCTGTTGACTGCCTCTGCTTGGCAACCGTCAGATTTGATTACTTATACTGATTGAAAT CATCATAGCCACACGATTGGCAGAGAAGTGAATCTTAAAGAAATGAGAAATCATAATGATTGCCAAGCTTGTGATTTTTTAATTTTATTATTGTTTAATT GGTTGGGTCCTATTATGTGGGAAACCAAACTAGAAGGAGAAAGAGGATGGGATTATGTTTGTCTAGTGTATACTATATTAATATTAGTAATCATTATGCA TGAGTCCTTTTTGTTTGTGACGTTCTTTCTTGGATTAAATAATGATGAATAACAACAAATCATGTTGAAAGAGAGCAGAGACTGTACACTCACGTAGAAA ATACTGTAGTAAAATAGTAATGCTCAATTTACTCTAACCCTAGACAAAATTCAATGTAAGAGGTGGGCCTAACCTAACTCTTCACGGATGTCTTCTGTTC TTTCATCAAACATTATTACCCTTCTATATAAAATTCAAAGGTTATTTATTGCATTACTTTTTCTATCAACAAAGGTTATTTATTGCATTACTAACTAGCA TGTATTATTGCACTTAATGGATGTTAACAACTATTTAATATTATCGGAATCAAATAAAGAAAATGTATATGAAAAAAGTTTGTCCTTTAGTATTGGAGGT TAGTCGGACTGGGGGGCCTGTAGCTCAGGTTACTGAGTTCATGTTAGTACTGTAGTTGACTTGCTGGGAGAGGTACCTGAAAAGTTTATCTGATGCGTAA GTCAGTAAGGACTCTAGAGAGAAAGTATAATATAAGAGGGAGTGAAAATATCAGAGATAAGATTAAGATTCTTCCGTAGGAGATACTCCCTTATTTAAAG GAACTGAGATGCTGACGTGTATGTCCAGCTTCCGCTGTTGATGGTGATGCTGAGCCTGCTAGGGTGACATACATAGTTCAACAAAGGTGAAGATTTGGGC CTCTAGATAGCTTGGCATGACCCAATCTGGTGTGGCCTTGATCAAGCCCTCAACACTGCGAGTTCGGAAACAGGTTAGGCCGCCACATTGGAATCCACTG ACCGGGTTCACGGAACCCAAGATGATGGACGGTACAAAGACATACCCTGTTTTAATCGAGGAGTAACAAAATTGTATTTAGCTTTTCCTAAATTCAACTT TTTCTATTATCCTAAAGCATGTGTTATAAAAGAGCTGATTAAAAAGTAGAGGCCTTTTGTACAGTGCAGCTAACGAGACAGTTTGGACATTTTTAATCCA ACTTTGTCTTAAGTTGTAGCTTTCGGTTTGGATATTTTGTATTAGCTTTATCCAGACTTTAATTAAAC
• Tissue: pods
• Gene name: LI_gene_162294;
• Additional information: details;

Expression of Ll_transcript_337973

FPKM

• PAB: 11.1
• PNAB: 6.6
• PS1: 11.5
• PS2: 4.7
• PS3: 8.7
• PW1: 4.9
• PW2: 3.7
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337973

• Blastp: Scarecrow-like protein 23 from Arabidopsis with 64.73% of identity
• Blastx: Scarecrow-like protein 23 from Arabidopsis with 70.88% of identity
• Eggnog: Transcription factor(ENOG4110TCK)
• Kegg: Link to kegg annotations (AT5G41920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413821.1)
• Pfam: GRAS domain family (PF03514.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;