Ll_transcript_337635

• Id Trinity: TRINITY_DN48587_c3_g2_i13
• Name Transcript: Ll_transcript_337635
• Sequence: CAGGTTGTGGAAGCAGTGGATTCCTTGTATTCAGAGTTCAGGGCTGTTGATAATTTGGTTGCTTGCAATACAACACGCGTCCTTAAAGCTTTCCAGAATG CACATGTTGGATCTCATGTAAGCATGCCCATGGGTTTAAGGCTAATTATAATTATTCACAATTATGATTGGAATTGGTAAATCATTCTTTTGAGCCACTT GGCAGATTCTGATGTGCTTTTTGAAAATAATAGAGTCGTAGTGAGAGAGTCGAGAGAAGGGATAAGTGGTAAAGTAGAGTATAAGGGGAAAGCGAAGTTT TGTAATCAATTGATTTGCTTTTAAGCTGAAGTGAAACTGACTATATGAAATGCATATTTAGTAAGATGCGTGTTAGCACTGACTTAGATGTGAAAATTAG AGGTCAACCCATATAACAAGTCACATAATTGAGGTGCCAGTAGTTTTATGATGCAGACTGATGGAGAAATAGAGGGAGGTGTAAATCATATGATTCAAAT GGGTGGATAAAGTGTTATCAAAAGTTACCTATCAAACTAGAAGAAAAGTTTAAAATGGTATGCTTTATGGTACTGAATACTGATACTGAATGTTTGCTAG TAAAGTTCCAACAATGGCATATGGAGAGTGTGGCAGAGATGAGATTGTTGCAGACGTACAAGAAAAGATAGGAATAATATTAGGAATTAACATATTATAT GATAAGTAAGAGTTACCTATTGAGGAAAAGATGGAATAAGTATGTGTAAGATGGTGTAGATGTTGAGAACATTAGTAGAAGCCTCTGTTAGAAGAGTCGA CCATATGAAAATAGGAGAGGAAACCCAAGAAAACTCTAAGTGGAACCATTAGAAAGAATTTATACCTAAAGGCCTATAAAATTATTTGGGTTTTGGTAGA ACATGGTGATTCATTTCATGATCCATTTAGCCTCCGTCACCTAGTGAGAAAAGACTTCGATTGTTGTTGGATAGATTATGATAGTAGTGAATTATTTGGG CAATTTGAGCAAAAGCATTCAAAAGTAGGAAACTCATACCTTAATGCCTTTAAAGACAGTTTTTTTGTGCTCTATCATAAATTCAATAGTAAGGTGATTG ATTGTGTAGTTCCATGTGTTGGACCAGACTGCAACCGGGGAGTTACAATGTTACCAGGGTATGTGAAGAGTGGAAAGCCACAAGTGAGACACCACGTCTT GAACTAAAACCTTAAGGCATTAGTTCCATGGGCTTTTCCTACATATAAACTCTTTCACTCTTCCCCACATATCCAATGTGGGACTTCACACTTGAATAAA CCCAACACCATGTTTAATCACTATTATCTTTTTTTAATGTAAATTACCATTCTGTTTGAAGCCCTTGGCAGTTGATACAATCAGATAGCCGTACTTATTT GTTTTAAGAGTTATTTTCTGTATTTTGCGATTTTAATTGGTCGTTGTCATGCACATTAAATATTAATATCAGCACTTTGGTGGTTGCACTGGTTATGGCC ATGATGAAGCTGGGGGGCGTGAGGCTCTTGACCAGGTTTTTGCAGAAATTGTTGGGGCTGAATCAGCTATTGTTCGTTCACAGGTTCTCAGTTCTCCATG TTATTTTTTGTCACATTCACTTCTTCCTTCTTAGTTCTTACTGAACTTGACAATATAGAAGTCATAGTATTATTCTGTCAACAGTTCTTCTCAGGTACTC ATGCTATCACATGTGCTTTATTTGCCCTCTTGAGGCCTGGGGACGAGTTGCTGGCGCTCCCTATGATACCCTAGAGGAAGTAATTGGGAAAAGGGACTCT GGTGGATTGGGCTCCCTCCAAGATTTTGGGGTGAAGTACCGCGAAGTTCCACTTGCTGAGGATGGTGGACTTGATTGGAATGCACTGATGGTTGCTGTCA AACCCGAAACAAAATGTGCACTCATACAAAGGTCATGTGGCTATTCATGGCGTCAGAGTTTGAGTGTTAGTGACATAGGGAAGGCGATAAAAATAATCAA AGTATGGTTCTGAATGTGCTCTTGCTTTGAAATATAGCATTATACTTTTCAGTTAGTATTATTCTAGCCAAGTTACTACTATAAATCCCCTTTATTTTTT ATCATGAAATTTTCACTTTATGGCATGTCATCTCATTTTTCAGTGCAGAGATGCCAGGAGGGAATGAGATACCAAAGACACATATTAGGATTCTGCGCAT TGTACAAAATAGCGTCTTAATAATCAATTAGTTTGTGCTATTCTCCTGTAACTTTCTACTCATGAAACCATCATCCTATGACAGCTTCTCGTCAACATTT ACATACGCACAACCATGTTTTCTCATTTAAAAAGGAAAAAAAGAAAACCAGAGTGATATTACTGTTCTTATAAGTACATAGCAGAACATATTGTCTCCTT TAACCTTTTAATTCATGGTATTTTTTCACTCCATGATATGATCTTGCGCATATTTATATACAGATGCAAAATCCTGGCTGCTTAGTCATGGTGGACAATT GCTATGGTGAATTTGTCGAAAGCATTGAACCTCCCATGGTGGGCGCAGATCTGATTGCAGGCAGTTTGATAAAGAATCCGGGTGGAACAATTGCACCATG TGGTGGATATGTTGCTGGGAGAAAAAAATGGGTTGAGGCAGCTGCTGCTCGTCTTTCTGCACCTGGGCTTGGTGTGGATTGTGGTGCAACCCCTGGTGAT ATCATGCGAGCCTTCTTCCAAGGATTATTTCTTTCGCCTCAAATGGTTGGGGAAGCAATCAAGGGTTCCCTCCTGATTGCTGAAGTTTTGGCATCTGAAG GCTATAAAGTACAGCCACTTCCTCGTGTCCCCCGAAGTGATACTGTTCAGGCTGTACAGCTTGGGAGCCGTAAGCGTCTTCTTGCTTTCTGTGAAGCTGT TCAAAGAAGCTCTCCTGTAGGTTCATATACCAAACCAGTTGCTGGTACCACTCCTGGATATGCATCAGAGGTGATCTTTGCTGATGGAACCTTCATTGAT GGGAGTACTAGTGAGCTTTCATGTGATGGCCCTCTTAGAGAACCATTTGCTGTATTCTGCCAAGGTGGCACCCATTGGACTCAATGGGGACTAGTCCTAG CAGAAGTTTTGAAATCTATAGATGGAATATAATTTTTTGTCAGTAACTTCATATTCAAAGGATGATATAAATTTAGATTGGTACAATTATATAACACAAG AAATTATTTGTGTATAACAAGATCACTGGACTACTGCTGAGAGGAACAACAAGTAAAGCTTATTTTTGGAGTCTGGTCCAGCATTGTGTAGGTTCTGTTA TTTTTTTTACCTCGTTGAAAAGGAGCTGTTATTCATAGTCTTCTTACACTAGTAGATTAATTGATATCTAGTGTTTATCTCGATTATTACACCATATTTT CTGTCAGAAGCAAGCTTCCTGTGATTATTAGATTTGACTCTCAGTACTGTTTTCCTGATCCATTTCAATATACTGATTTTCAC
• Tissue: pods
• Gene name: LI_gene_162331;
• Additional information: details;

Expression of Ll_transcript_337635

FPKM

• PAB: 0.3
• PNAB: 0
• PS1: 0.4
• PS2: 0.1
• PS3: 0.5
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337635

• Blastp: Uncharacterized protein YnbB from Bacillus with 44.39% of identity
• Blastx: Uncharacterized protein YnbB from Bacillus with 43.33% of identity
• Eggnog: aluminum resistance protein(COG4100)
• Kegg: Link to kegg annotations (BSU17440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453605.1)
• Pfam: Methionine gamma-lyase (PF06838.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;